RNA–Protein interactions for RNA: ENST00000368125.8

CADM3-202, Transcript of cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CADM3, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM3-202ENST00000368125 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
CADM3-202ENST00000368125 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.92
CADM3-202ENST00000368125 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
CADM3-202ENST00000368125 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
CADM3-202ENST00000368125 CCDC180Q9P1Z9 1646 aa20.19■□□□□ 0.82
CADM3-202ENST00000368125 DCAF8L2P0C7V8 631 aa20.13■□□□□ 0.81
CADM3-202ENST00000368125 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
CADM3-202ENST00000368125 SLC24A1O60721 1099 aa19.97■□□□□ 0.79
CADM3-202ENST00000368125 MYO15BQ96JP2 1530 aa19.83■□□□□ 0.77
CADM3-202ENST00000368125 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
CADM3-202ENST00000368125 MYT1Q01538 1121 aa19.63■□□□□ 0.73
CADM3-202ENST00000368125 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
CADM3-202ENST00000368125 LOC105371045A0A1W2PR82 267 aa19.32■□□□□ 0.68
CADM3-202ENST00000368125 PCGF6Q9BYE7 350 aa19.28■□□□□ 0.68
CADM3-202ENST00000368125 SCRIBQ14160 1630 aa19.23■□□□□ 0.67
CADM3-202ENST00000368125 HRCP23327 699 aa19.18■□□□□ 0.66
CADM3-202ENST00000368125 PRKCSHP14314 528 aaPredicted RBP19.18■□□□□ 0.66
CADM3-202ENST00000368125 ABCC9O60706 1549 aa19.16■□□□□ 0.66
CADM3-202ENST00000368125 PPARGC1BQ86YN6 1023 aaKnown RBP19.08■□□□□ 0.64
CADM3-202ENST00000368125 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
CADM3-202ENST00000368125 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
CADM3-202ENST00000368125 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
CADM3-202ENST00000368125 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.62
CADM3-202ENST00000368125 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
CADM3-202ENST00000368125 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
CADM3-202ENST00000368125 MROH2BQ7Z745 1585 aa18.76■□□□□ 0.59
CADM3-202ENST00000368125 APLP2Q06481 763 aa18.75■□□□□ 0.59
CADM3-202ENST00000368125 TTBK1Q5TCY1 1321 aaPredicted RBP18.69■□□□□ 0.58
CADM3-202ENST00000368125 WIZO95785 1651 aa18.69■□□□□ 0.58
CADM3-202ENST00000368125 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
CADM3-202ENST00000368125 NACADO15069 1562 aa18.67■□□□□ 0.58
CADM3-202ENST00000368125 DAXXQ9UER7 740 aaPredicted RBP18.55■□□□□ 0.56
CADM3-202ENST00000368125 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
CADM3-202ENST00000368125 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
CADM3-202ENST00000368125 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
CADM3-202ENST00000368125 ABCC8Q09428 1581 aa18.36■□□□□ 0.53
CADM3-202ENST00000368125 UNC13AQ9UPW8 1703 aa18.33■□□□□ 0.52
CADM3-202ENST00000368125 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
CADM3-202ENST00000368125 SMARCA4P51532 1647 aa18.26■□□□□ 0.51
CADM3-202ENST00000368125 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
CADM3-202ENST00000368125 ERICH6Q7L0X2 663 aa18.25■□□□□ 0.51
CADM3-202ENST00000368125 PABPN1Q86U42 306 aaKnown RBP eCLIP18.25■□□□□ 0.51
CADM3-202ENST00000368125 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
CADM3-202ENST00000368125 TOP2AP11388 1531 aaKnown RBP18.22■□□□□ 0.51
CADM3-202ENST00000368125 SMARCA2P51531 1590 aa18.2■□□□□ 0.5
CADM3-202ENST00000368125 SOGA1O94964 1423 aa18.17■□□□□ 0.5
CADM3-202ENST00000368125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
CADM3-202ENST00000368125 GTF3C3Q9Y5Q9 886 aa18.16■□□□□ 0.5
CADM3-202ENST00000368125 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.49
CADM3-202ENST00000368125 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
CADM3-202ENST00000368125 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
CADM3-202ENST00000368125 CEP162Q5TB80 1403 aa18.02■□□□□ 0.48
CADM3-202ENST00000368125 CCER1Q8TC90 406 aaPredicted RBP17.97■□□□□ 0.47
CADM3-202ENST00000368125 UBTFP17480 764 aaKnown RBP17.95■□□□□ 0.46
CADM3-202ENST00000368125 CSRNP3Q8WYN3 585 aa17.93■□□□□ 0.46
CADM3-202ENST00000368125 ACIN1Q9UKV3 1341 aaKnown RBP17.93■□□□□ 0.46
CADM3-202ENST00000368125 DNAJC5BQ9UF47 199 aa17.91■□□□□ 0.46
CADM3-202ENST00000368125 YTHDC1Q96MU7 727 aaKnown RBP17.9■□□□□ 0.46
CADM3-202ENST00000368125 WRNQ14191 1432 aaPredicted RBP eCLIP17.88■□□□□ 0.45
CADM3-202ENST00000368125 TNIKQ9UKE5 1360 aa17.88■□□□□ 0.45
CADM3-202ENST00000368125 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
CADM3-202ENST00000368125 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
CADM3-202ENST00000368125 RANGAP1P46060 587 aaPredicted RBP17.82■□□□□ 0.44
CADM3-202ENST00000368125 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
CADM3-202ENST00000368125 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
CADM3-202ENST00000368125 ATAD2BQ9ULI0 1458 aa17.78■□□□□ 0.44
CADM3-202ENST00000368125 GOLGA3Q08378 1498 aa17.77■□□□□ 0.44
CADM3-202ENST00000368125 EEA1Q15075 1411 aa17.74■□□□□ 0.43
CADM3-202ENST00000368125 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
CADM3-202ENST00000368125 RAPGEF2Q9Y4G8 1499 aa17.69■□□□□ 0.42
CADM3-202ENST00000368125 HNRNPUL2Q1KMD3 747 aaKnown RBP17.69■□□□□ 0.42
CADM3-202ENST00000368125 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.42
CADM3-202ENST00000368125 CEP164Q9UPV0 1460 aa17.64■□□□□ 0.41
CADM3-202ENST00000368125 CLIP1P30622 1438 aa17.64■□□□□ 0.41
CADM3-202ENST00000368125 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
CADM3-202ENST00000368125 KIF21BO75037 1637 aa17.61■□□□□ 0.41
CADM3-202ENST00000368125 RTN4Q9NQC3 1192 aaKnown RBP17.54■□□□□ 0.4
CADM3-202ENST00000368125 VPS8Q8N3P4 1428 aa17.53■□□□□ 0.4
CADM3-202ENST00000368125 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
CADM3-202ENST00000368125 ANP32EQ9BTT0 268 aa17.52■□□□□ 0.39
CADM3-202ENST00000368125 TOP2BQ02880 1626 aa17.52■□□□□ 0.39
CADM3-202ENST00000368125 PLEKHG5O94827 1062 aa17.5■□□□□ 0.39
CADM3-202ENST00000368125 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.39
CADM3-202ENST00000368125 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
CADM3-202ENST00000368125 CUX1P39880 1505 aa17.43■□□□□ 0.38
CADM3-202ENST00000368125 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
CADM3-202ENST00000368125 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
CADM3-202ENST00000368125 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
CADM3-202ENST00000368125 PRXQ9BXM0 1461 aa17.38■□□□□ 0.37
CADM3-202ENST00000368125 MIER1Q8N108 512 aa17.35■□□□□ 0.37
CADM3-202ENST00000368125 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
CADM3-202ENST00000368125 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
CADM3-202ENST00000368125 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
CADM3-202ENST00000368125 CFTRP13569 1480 aa17.26■□□□□ 0.35
CADM3-202ENST00000368125 KIF27Q86VH2 1401 aa17.25■□□□□ 0.35
CADM3-202ENST00000368125 ITGAEP38570 1179 aa17.24■□□□□ 0.35
CADM3-202ENST00000368125 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
CADM3-202ENST00000368125 ARHGAP35Q9NRY4 1499 aa17.23■□□□□ 0.35
CADM3-202ENST00000368125 TIMELESSQ9UNS1 1208 aa17.21■□□□□ 0.35
CADM3-202ENST00000368125 KLHL34Q8N239 644 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms