RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 DCAF8L2P0C7V8 631 aa17.93■□□□□ 0.46
OTOF-201ENST00000272371 PELP1Q8IZL8 1130 aaKnown RBP17.37■□□□□ 0.37
OTOF-201ENST00000272371 NISCHQ9Y2I1 1504 aa17.01■□□□□ 0.31
OTOF-201ENST00000272371 MYT1Q01538 1121 aa16.91■□□□□ 0.3
OTOF-201ENST00000272371 ERICH6Q7L0X2 663 aa16.74■□□□□ 0.27
OTOF-201ENST00000272371 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
OTOF-201ENST00000272371 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
OTOF-201ENST00000272371 CENPBP07199 599 aaPredicted RBP16.51■□□□□ 0.23
OTOF-201ENST00000272371 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
OTOF-201ENST00000272371 PCGF6Q9BYE7 350 aa16.26■□□□□ 0.19
OTOF-201ENST00000272371 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
OTOF-201ENST00000272371 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
OTOF-201ENST00000272371 FAM9AQ8IZU1 332 aaPredicted RBP16.14■□□□□ 0.17
OTOF-201ENST00000272371 APLP2Q06481 763 aa16.13■□□□□ 0.17
OTOF-201ENST00000272371 NEFLP07196 543 aa16.07■□□□□ 0.16
OTOF-201ENST00000272371 YTHDC1Q96MU7 727 aaKnown RBP15.99■□□□□ 0.15
OTOF-201ENST00000272371 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
OTOF-201ENST00000272371 DAXXQ9UER7 740 aaPredicted RBP15.74■□□□□ 0.11
OTOF-201ENST00000272371 HRCP23327 699 aa15.56■□□□□ 0.08
OTOF-201ENST00000272371 RTL5Q5HYW3 569 aaPredicted RBP15.56■□□□□ 0.08
OTOF-201ENST00000272371 RANGAP1P46060 587 aaPredicted RBP15.44■□□□□ 0.06
OTOF-201ENST00000272371 TRIM26Q12899 539 aaPredicted RBP15.41■□□□□ 0.06
OTOF-201ENST00000272371 MYT1LQ9UL68 1186 aa15.4■□□□□ 0.06
OTOF-201ENST00000272371 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
OTOF-201ENST00000272371 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
OTOF-201ENST00000272371 ATP1B4Q9UN42 357 aaPredicted RBP15.33■□□□□ 0.05
OTOF-201ENST00000272371 ABCC9O60706 1549 aa15.28■□□□□ 0.04
OTOF-201ENST00000272371 PPARGC1BQ86YN6 1023 aaKnown RBP15.25■□□□□ 0.03
OTOF-201ENST00000272371 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
OTOF-201ENST00000272371 DIEXFQ68CQ4 756 aaKnown RBP15.17■□□□□ 0.02
OTOF-201ENST00000272371 GTF3C3Q9Y5Q9 886 aa15.17■□□□□ 0.02
OTOF-201ENST00000272371 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
OTOF-201ENST00000272371 POLR3GLQ9BT43 218 aa15.12■□□□□ 0.01
OTOF-201ENST00000272371 PABPN1Q86U42 306 aaKnown RBP eCLIP15.12■□□□□ 0.01
OTOF-201ENST00000272371 BCANQ96GW7 911 aa15.05■□□□□ 0
OTOF-201ENST00000272371 CDK11AQ9UQ88 783 aaPredicted RBP15.05■□□□□ 0
OTOF-201ENST00000272371 EIF5BO60841 1220 aaKnown RBP15.04■□□□□ -0
OTOF-201ENST00000272371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.02■□□□□ -0
OTOF-201ENST00000272371 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02■□□□□ -0
OTOF-201ENST00000272371 GLIPR1L2Q4G1C9 344 aa15.01□□□□□ -0.01
OTOF-201ENST00000272371 CNGB1Q14028 1251 aaPredicted RBP15.01□□□□□ -0.01
OTOF-201ENST00000272371 CHIC1Q5VXU3 224 aa14.98□□□□□ -0.01
OTOF-201ENST00000272371 FBLN2P98095 1184 aa14.96□□□□□ -0.01
OTOF-201ENST00000272371 ITGAEP38570 1179 aa14.94□□□□□ -0.02
OTOF-201ENST00000272371 ACIN1Q9UKV3 1341 aaKnown RBP14.86□□□□□ -0.03
OTOF-201ENST00000272371 ANP32AP39687 249 aaKnown RBP14.85□□□□□ -0.03
OTOF-201ENST00000272371 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
OTOF-201ENST00000272371 LOC105371045A0A1W2PR82 267 aa14.8□□□□□ -0.04
OTOF-201ENST00000272371 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
OTOF-201ENST00000272371 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
OTOF-201ENST00000272371 ANP32CO43423 234 aa14.72□□□□□ -0.05
OTOF-201ENST00000272371 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
OTOF-201ENST00000272371 ANP32BQ92688 251 aaKnown RBP14.71□□□□□ -0.05
OTOF-201ENST00000272371 NPM2Q86SE8 214 aaKnown RBP14.69□□□□□ -0.06
OTOF-201ENST00000272371 ZBTB47Q9UFB7 747 aaPredicted RBP14.67□□□□□ -0.06
OTOF-201ENST00000272371 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
OTOF-201ENST00000272371 ESF1Q9H501 851 aaKnown RBP14.61□□□□□ -0.07
OTOF-201ENST00000272371 NBR1Q14596 966 aa14.6□□□□□ -0.07
OTOF-201ENST00000272371 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
OTOF-201ENST00000272371 NEUROD1Q13562 356 aa14.56□□□□□ -0.08
OTOF-201ENST00000272371 FKBP8Q14318 412 aa14.54□□□□□ -0.08
OTOF-201ENST00000272371 BCL11AQ9H165 835 aa14.49□□□□□ -0.09
OTOF-201ENST00000272371 FAM50AQ14320 339 aaKnown RBP14.47□□□□□ -0.09
OTOF-201ENST00000272371 HSP90AA1P07900 732 aaKnown RBP14.46□□□□□ -0.1
OTOF-201ENST00000272371 SCAF1Q9H7N4 1312 aaKnown RBP14.43□□□□□ -0.1
OTOF-201ENST00000272371 TRIM52Q96A61 297 aa14.43□□□□□ -0.1
OTOF-201ENST00000272371 ARXQ96QS3 562 aa14.42□□□□□ -0.1
OTOF-201ENST00000272371 UPF2Q9HAU5 1272 aaKnown RBP14.41□□□□□ -0.1
OTOF-201ENST00000272371 TNNT2P45379 298 aaPredicted RBP14.39□□□□□ -0.11
OTOF-201ENST00000272371 SCRIBQ14160 1630 aa14.39□□□□□ -0.11
OTOF-201ENST00000272371 ANP32EQ9BTT0 268 aa14.37□□□□□ -0.11
OTOF-201ENST00000272371 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.11
OTOF-201ENST00000272371 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
OTOF-201ENST00000272371 TRIM44Q96DX7 344 aaPredicted RBP14.28□□□□□ -0.12
OTOF-201ENST00000272371 CCDC180Q9P1Z9 1646 aa14.27□□□□□ -0.12
OTOF-201ENST00000272371 SLC24A1O60721 1099 aa14.27□□□□□ -0.13
OTOF-201ENST00000272371 CCDC136Q96JN2 1154 aa14.26□□□□□ -0.13
OTOF-201ENST00000272371 HNRNPUQ00839 825 aaKnown RBP eCLIP14.26□□□□□ -0.13
OTOF-201ENST00000272371 NEFMP07197 916 aa14.25□□□□□ -0.13
OTOF-201ENST00000272371 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
OTOF-201ENST00000272371 NAP1L5Q96NT1 182 aaPredicted RBP14.2□□□□□ -0.14
OTOF-201ENST00000272371 DDRGK1Q96HY6 314 aa14.2□□□□□ -0.14
OTOF-201ENST00000272371 ARID4BQ4LE39 1312 aaPredicted RBP14.19□□□□□ -0.14
OTOF-201ENST00000272371 CDK11BP21127 795 aaKnown RBP14.19□□□□□ -0.14
OTOF-201ENST00000272371 ERICH6BQ5W0A0 696 aa14.18□□□□□ -0.14
OTOF-201ENST00000272371 FAM9BQ8IZU0 186 aa14.15□□□□□ -0.14
OTOF-201ENST00000272371 STAG3Q9UJ98 1225 aa14.15□□□□□ -0.14
OTOF-201ENST00000272371 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.11□□□□□ -0.15
OTOF-201ENST00000272371 BECN1Q14457 450 aa14.11□□□□□ -0.15
OTOF-201ENST00000272371 IRX6P78412 446 aaPredicted RBP14.1□□□□□ -0.15
OTOF-201ENST00000272371 RB1CC1Q8TDY2 1594 aa14.1□□□□□ -0.15
OTOF-201ENST00000272371 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
OTOF-201ENST00000272371 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
OTOF-201ENST00000272371 DNTTIP2Q5QJE6 756 aaKnown RBP14.09□□□□□ -0.15
OTOF-201ENST00000272371 ARID3CA6NKF2 412 aa14.07□□□□□ -0.16
OTOF-201ENST00000272371 PTMAP06454 111 aaKnown RBP14.05□□□□□ -0.16
OTOF-201ENST00000272371 SALL2Q9Y467 1007 aaPredicted RBP14.05□□□□□ -0.16
OTOF-201ENST00000272371 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
OTOF-201ENST00000272371 NCLP19338 710 aaKnown RBP14.04□□□□□ -0.16
OTOF-201ENST00000272371 GOLGA6L22H0YM25 854 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms