RNA–Protein interactions for RNA: ENST00000413689.5

SCN5A-203, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN5A, Length 8,504 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-203ENST00000413689 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
SCN5A-203ENST00000413689 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
SCN5A-203ENST00000413689 MYT1Q01538 1121 aa16.84■□□□□ 0.29
SCN5A-203ENST00000413689 NISCHQ9Y2I1 1504 aa16.66■□□□□ 0.26
SCN5A-203ENST00000413689 SUPT5HO00267 1087 aaKnown RBP16.61■□□□□ 0.25
SCN5A-203ENST00000413689 CCER1Q8TC90 406 aaPredicted RBP16.35■□□□□ 0.21
SCN5A-203ENST00000413689 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
SCN5A-203ENST00000413689 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
SCN5A-203ENST00000413689 CENPBP07199 599 aaPredicted RBP16.08■□□□□ 0.16
SCN5A-203ENST00000413689 PCGF6Q9BYE7 350 aa16.07■□□□□ 0.16
SCN5A-203ENST00000413689 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
SCN5A-203ENST00000413689 ZEB1P37275 1124 aaPredicted RBP15.93■□□□□ 0.14
SCN5A-203ENST00000413689 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
SCN5A-203ENST00000413689 APLP2Q06481 763 aa15.9■□□□□ 0.14
SCN5A-203ENST00000413689 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
SCN5A-203ENST00000413689 NEFLP07196 543 aa15.66■□□□□ 0.1
SCN5A-203ENST00000413689 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
SCN5A-203ENST00000413689 DAXXQ9UER7 740 aaPredicted RBP15.42■□□□□ 0.06
SCN5A-203ENST00000413689 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
SCN5A-203ENST00000413689 HRCP23327 699 aa15.4■□□□□ 0.06
SCN5A-203ENST00000413689 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
SCN5A-203ENST00000413689 RANGAP1P46060 587 aaPredicted RBP15.25■□□□□ 0.03
SCN5A-203ENST00000413689 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
SCN5A-203ENST00000413689 RTL5Q5HYW3 569 aaPredicted RBP15.17■□□□□ 0.02
SCN5A-203ENST00000413689 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
SCN5A-203ENST00000413689 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
SCN5A-203ENST00000413689 ZNF316A6NFI3 1004 aaPredicted RBP15□□□□□ -0.01
SCN5A-203ENST00000413689 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
SCN5A-203ENST00000413689 GLIPR1L2Q4G1C9 344 aa14.87□□□□□ -0.03
SCN5A-203ENST00000413689 LOC105371045A0A1W2PR82 267 aa14.87□□□□□ -0.03
SCN5A-203ENST00000413689 CHIC1Q5VXU3 224 aa14.82□□□□□ -0.04
SCN5A-203ENST00000413689 GTF3C3Q9Y5Q9 886 aa14.78□□□□□ -0.04
SCN5A-203ENST00000413689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.04
SCN5A-203ENST00000413689 ITGAEP38570 1179 aa14.74□□□□□ -0.05
SCN5A-203ENST00000413689 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
SCN5A-203ENST00000413689 MYT1LQ9UL68 1186 aa14.7□□□□□ -0.06
SCN5A-203ENST00000413689 POLR3GLQ9BT43 218 aa14.68□□□□□ -0.06
SCN5A-203ENST00000413689 CLSPNQ9HAW4 1339 aa14.66□□□□□ -0.06
SCN5A-203ENST00000413689 CDK11AQ9UQ88 783 aaPredicted RBP14.58□□□□□ -0.08
SCN5A-203ENST00000413689 ACIN1Q9UKV3 1341 aaKnown RBP14.56□□□□□ -0.08
SCN5A-203ENST00000413689 CNGB1Q14028 1251 aaPredicted RBP14.55□□□□□ -0.08
SCN5A-203ENST00000413689 ANP32BQ92688 251 aaKnown RBP14.52□□□□□ -0.09
SCN5A-203ENST00000413689 BCANQ96GW7 911 aa14.51□□□□□ -0.09
SCN5A-203ENST00000413689 ANP32CO43423 234 aa14.47□□□□□ -0.09
SCN5A-203ENST00000413689 ANP32AP39687 249 aaKnown RBP14.46□□□□□ -0.09
SCN5A-203ENST00000413689 EIF5BO60841 1220 aaKnown RBP14.41□□□□□ -0.1
SCN5A-203ENST00000413689 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
SCN5A-203ENST00000413689 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
SCN5A-203ENST00000413689 DCAF1Q9Y4B6 1507 aa14.37□□□□□ -0.11
SCN5A-203ENST00000413689 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
SCN5A-203ENST00000413689 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
SCN5A-203ENST00000413689 CCDC180Q9P1Z9 1646 aa14.28□□□□□ -0.12
SCN5A-203ENST00000413689 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
SCN5A-203ENST00000413689 TNNT2P45379 298 aaPredicted RBP14.22□□□□□ -0.13
SCN5A-203ENST00000413689 SCAF1Q9H7N4 1312 aaKnown RBP14.19□□□□□ -0.14
SCN5A-203ENST00000413689 FKBP8Q14318 412 aa14.17□□□□□ -0.14
SCN5A-203ENST00000413689 UPF2Q9HAU5 1272 aaKnown RBP14.16□□□□□ -0.14
SCN5A-203ENST00000413689 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
SCN5A-203ENST00000413689 ZNF326Q5BKZ1 582 aaKnown RBP14.13□□□□□ -0.15
SCN5A-203ENST00000413689 NPM2Q86SE8 214 aaKnown RBP14.13□□□□□ -0.15
SCN5A-203ENST00000413689 NEFMP07197 916 aa14.13□□□□□ -0.15
SCN5A-203ENST00000413689 HSP90AA1P07900 732 aaKnown RBP14.12□□□□□ -0.15
SCN5A-203ENST00000413689 ANP32EQ9BTT0 268 aa14.07□□□□□ -0.16
SCN5A-203ENST00000413689 NBR1Q14596 966 aa14.07□□□□□ -0.16
SCN5A-203ENST00000413689 HNRNPUQ00839 825 aaKnown RBP eCLIP14.03□□□□□ -0.16
SCN5A-203ENST00000413689 TRIM44Q96DX7 344 aaPredicted RBP14.02□□□□□ -0.16
SCN5A-203ENST00000413689 TONSLQ96HA7 1378 aa14□□□□□ -0.17
SCN5A-203ENST00000413689 SCRIBQ14160 1630 aa14□□□□□ -0.17
SCN5A-203ENST00000413689 BCL11AQ9H165 835 aa13.97□□□□□ -0.17
SCN5A-203ENST00000413689 CCDC136Q96JN2 1154 aa13.96□□□□□ -0.17
SCN5A-203ENST00000413689 NCLP19338 710 aaKnown RBP13.96□□□□□ -0.18
SCN5A-203ENST00000413689 DDX10Q13206 875 aaKnown RBP13.93□□□□□ -0.18
SCN5A-203ENST00000413689 CDK11BP21127 795 aaKnown RBP13.91□□□□□ -0.18
SCN5A-203ENST00000413689 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
SCN5A-203ENST00000413689 MIER1Q8N108 512 aa13.9□□□□□ -0.18
SCN5A-203ENST00000413689 ABCC9O60706 1549 aa13.89□□□□□ -0.19
SCN5A-203ENST00000413689 FAM9BQ8IZU0 186 aa13.89□□□□□ -0.19
SCN5A-203ENST00000413689 ERICH6BQ5W0A0 696 aa13.88□□□□□ -0.19
SCN5A-203ENST00000413689 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
SCN5A-203ENST00000413689 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
SCN5A-203ENST00000413689 MYO15BQ96JP2 1530 aa13.85□□□□□ -0.19
SCN5A-203ENST00000413689 BECN1Q14457 450 aa13.84□□□□□ -0.19
SCN5A-203ENST00000413689 ZCCHC6Q5VYS8 1495 aaKnown RBP13.83□□□□□ -0.2
SCN5A-203ENST00000413689 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.83□□□□□ -0.2
SCN5A-203ENST00000413689 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
SCN5A-203ENST00000413689 ARXQ96QS3 562 aa13.82□□□□□ -0.2
SCN5A-203ENST00000413689 GOLGA6L22H0YM25 854 aa13.8□□□□□ -0.2
SCN5A-203ENST00000413689 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCN5A-203ENST00000413689 P3H3Q8IVL6 736 aa13.78□□□□□ -0.2
SCN5A-203ENST00000413689 MRS2Q9HD23 443 aa13.76□□□□□ -0.21
SCN5A-203ENST00000413689 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
SCN5A-203ENST00000413689 SALL2Q9Y467 1007 aaPredicted RBP13.72□□□□□ -0.21
SCN5A-203ENST00000413689 ARID3CA6NKF2 412 aa13.69□□□□□ -0.22
SCN5A-203ENST00000413689 FBLN2P98095 1184 aa13.69□□□□□ -0.22
SCN5A-203ENST00000413689 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
SCN5A-203ENST00000413689 CLIP1P30622 1438 aa13.68□□□□□ -0.22
SCN5A-203ENST00000413689 WDR43Q15061 677 aaKnown RBP eCLIP13.67□□□□□ -0.22
SCN5A-203ENST00000413689 PPM1GO15355 546 aaPredicted RBP13.66□□□□□ -0.22
SCN5A-203ENST00000413689 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
SCN5A-203ENST00000413689 NAP1L5Q96NT1 182 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms