Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 TCAF1P1-201ENST00000414990 2232 ntBASIC14.58□□□□□ -0.08
AP4S1Q9Y587 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
AP4S1Q9Y587 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AL049597.2-201ENST00000565575 961 ntBASIC14.57□□□□□ -0.08
AP4S1Q9Y587 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AC073389.1-201ENST00000595595 795 ntBASIC14.57□□□□□ -0.08
AP4S1Q9Y587 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AP4S1Q9Y587 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AP4S1Q9Y587 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms