Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 RNU6-415P-201ENST00000516252 97 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 RN7SKP253-201ENST00000516424 309 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AP001005.1-201ENST00000571755 1248 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC011467.4-201ENST00000594891 528 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AL139022.2-201ENST00000606934 443 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC093783.1-201ENST00000612976 329 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AP3S2-216ENST00000617003 1561 ntBASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 HLA-A-201ENST00000376802 1334 ntBASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 CFTRP3-201ENST00000376400 212 ntBASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 HLA-H-201ENST00000383620 1096 ntBASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 LBH-204ENST00000406087 559 ntTSL 4 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 ADH5P3-201ENST00000433842 1137 ntBASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 SPCS2P4-201ENST00000436160 681 ntBASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 AC093909.1-201ENST00000504731 1122 ntBASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 MRPL22P1-201ENST00000505398 616 ntBASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
KRTAP3-1Q9BYR8 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms