RNA–Protein interactions for RNA: ENST00000441841.1

LINC02243-201, Transcript of long intergenic non-protein coding RNA 2243, humanhuman

TSL 1 (best) BASIC

Gene LINC02243, Length 961 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02243-201ENST00000441841 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
LINC02243-201ENST00000441841 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
LINC02243-201ENST00000441841 PHF23Q9BUL5 403 aaPredicted RBP25.56■■□□□ 1.68
LINC02243-201ENST00000441841 SENP3Q9H4L4 574 aaPredicted RBP24.09■■□□□ 1.45
LINC02243-201ENST00000441841 PLPPR3Q6T4P5 718 aa23.9■■□□□ 1.42
LINC02243-201ENST00000441841 ADRA2BP18089 450 aa22.39■■□□□ 1.17
LINC02243-201ENST00000441841 FOXD1Q16676 465 aa22.26■■□□□ 1.15
LINC02243-201ENST00000441841 PPP6R1Q9UPN7 881 aa22.22■■□□□ 1.15
LINC02243-201ENST00000441841 KCNA4P22459 653 aa21.84■■□□□ 1.09
LINC02243-201ENST00000441841 EHMT2Q96KQ7 1210 aa21.5■■□□□ 1.03
LINC02243-201ENST00000441841 PIAS4Q8N2W9 510 aaPredicted RBP21.21■□□□□ 0.99
LINC02243-201ENST00000441841 PPP4R3CPQ6ZMV5 832 aa21.19■□□□□ 0.98
LINC02243-201ENST00000441841 SLC4A1APQ9BWU0 796 aaKnown RBP20.96■□□□□ 0.95
LINC02243-201ENST00000441841 NCBP3Q53F19 620 aaKnown RBP20.9■□□□□ 0.94
LINC02243-201ENST00000441841 CSRNP3Q8WYN3 585 aa20.83■□□□□ 0.93
LINC02243-201ENST00000441841 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
LINC02243-201ENST00000441841 CNKSR2Q8WXI2 1034 aa20.37■□□□□ 0.85
LINC02243-201ENST00000441841 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
LINC02243-201ENST00000441841 ZBTB22O15209 634 aa20.14■□□□□ 0.81
LINC02243-201ENST00000441841 MSH5O43196 834 aa20.11■□□□□ 0.81
LINC02243-201ENST00000441841 DNAJC5BQ9UF47 199 aa19.9■□□□□ 0.78
LINC02243-201ENST00000441841 MAPK8IP2Q13387 824 aaPredicted RBP19.89■□□□□ 0.77
LINC02243-201ENST00000441841 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
LINC02243-201ENST00000441841 RNF216Q9NWF9 866 aaPredicted RBP19.73■□□□□ 0.75
LINC02243-201ENST00000441841 HOXD11P31277 338 aaPredicted RBP19.4■□□□□ 0.7
LINC02243-201ENST00000441841 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
LINC02243-201ENST00000441841 SLC4A2P04920 1241 aa19.25■□□□□ 0.67
LINC02243-201ENST00000441841 MYCNP04198 464 aaPredicted RBP19.02■□□□□ 0.64
LINC02243-201ENST00000441841 ATXN8OSP0DMR3 200 aa19.02■□□□□ 0.64
LINC02243-201ENST00000441841 RTN4Q9NQC3 1192 aaKnown RBP18.83■□□□□ 0.6
LINC02243-201ENST00000441841 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
LINC02243-201ENST00000441841 FKBP8Q14318 412 aa18.74■□□□□ 0.59
LINC02243-201ENST00000441841 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
LINC02243-201ENST00000441841 DCAF8L1A6NGE4 600 aa18.47■□□□□ 0.55
LINC02243-201ENST00000441841 ATF5Q9Y2D1 282 aaPredicted RBP18.47■□□□□ 0.55
LINC02243-201ENST00000441841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.54
LINC02243-201ENST00000441841 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
LINC02243-201ENST00000441841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
LINC02243-201ENST00000441841 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
LINC02243-201ENST00000441841 SAMD1Q6SPF0 538 aaPredicted RBP18.36■□□□□ 0.53
LINC02243-201ENST00000441841 U3KPZ7 1027 aaPredicted RBP18.3■□□□□ 0.52
LINC02243-201ENST00000441841 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
LINC02243-201ENST00000441841 NISCHQ9Y2I1 1504 aa17.99■□□□□ 0.47
LINC02243-201ENST00000441841 APLP2Q06481 763 aa17.92■□□□□ 0.46
LINC02243-201ENST00000441841 FBXO3Q9UK99 471 aa17.79■□□□□ 0.44
LINC02243-201ENST00000441841 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
LINC02243-201ENST00000441841 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
LINC02243-201ENST00000441841 PROM2Q8N271 834 aa17.66■□□□□ 0.42
LINC02243-201ENST00000441841 FBLN2P98095 1184 aa17.57■□□□□ 0.4
LINC02243-201ENST00000441841 VASPP50552 380 aaPredicted RBP17.54■□□□□ 0.4
LINC02243-201ENST00000441841 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
LINC02243-201ENST00000441841 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
LINC02243-201ENST00000441841 POLA2Q14181 598 aa17.47■□□□□ 0.39
LINC02243-201ENST00000441841 IFNLR1Q8IU57 520 aaPredicted RBP17.39■□□□□ 0.37
LINC02243-201ENST00000441841 PLCB2Q00722 1185 aa17.36■□□□□ 0.37
LINC02243-201ENST00000441841 CAPN15O75808 1086 aa17.35■□□□□ 0.37
LINC02243-201ENST00000441841 RNF39Q9H2S5 420 aa17.35■□□□□ 0.37
LINC02243-201ENST00000441841 ZBTB12Q9Y330 459 aaPredicted RBP17.23■□□□□ 0.35
LINC02243-201ENST00000441841 PKD2Q13563 968 aa17.2■□□□□ 0.34
LINC02243-201ENST00000441841 C1QBPQ07021 282 aaKnown RBP17.19■□□□□ 0.34
LINC02243-201ENST00000441841 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
LINC02243-201ENST00000441841 ABCB7O75027 752 aa17.12■□□□□ 0.33
LINC02243-201ENST00000441841 HAP1P54257 671 aaPredicted RBP17.09■□□□□ 0.33
LINC02243-201ENST00000441841 SPOCK2Q92563 424 aa16.99■□□□□ 0.31
LINC02243-201ENST00000441841 KLHL34Q8N239 644 aa16.98■□□□□ 0.31
LINC02243-201ENST00000441841 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
LINC02243-201ENST00000441841 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
LINC02243-201ENST00000441841 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
LINC02243-201ENST00000441841 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
LINC02243-201ENST00000441841 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
LINC02243-201ENST00000441841 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
LINC02243-201ENST00000441841 DSG3P32926 999 aa16.86■□□□□ 0.29
LINC02243-201ENST00000441841 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
LINC02243-201ENST00000441841 SSUH2Q9Y2M2 353 aa16.86■□□□□ 0.29
LINC02243-201ENST00000441841 OSCARQ8IYS5 282 aa16.83■□□□□ 0.28
LINC02243-201ENST00000441841 BBXQ8WY36 941 aaPredicted RBP16.83■□□□□ 0.28
LINC02243-201ENST00000441841 PLCD3Q8N3E9 789 aa16.82■□□□□ 0.28
LINC02243-201ENST00000441841 BCANQ96GW7 911 aa16.81■□□□□ 0.28
LINC02243-201ENST00000441841 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.8■□□□□ 0.28
LINC02243-201ENST00000441841 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC02243-201ENST00000441841 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC02243-201ENST00000441841 MIER1Q8N108 512 aa16.74■□□□□ 0.27
LINC02243-201ENST00000441841 RGL2O15211 777 aa16.71■□□□□ 0.27
LINC02243-201ENST00000441841 PAXIP1Q6ZW49 1069 aaPredicted RBP16.69■□□□□ 0.26
LINC02243-201ENST00000441841 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
LINC02243-201ENST00000441841 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
LINC02243-201ENST00000441841 TAOK2Q9UL54 1235 aa16.58■□□□□ 0.24
LINC02243-201ENST00000441841 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
LINC02243-201ENST00000441841 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
LINC02243-201ENST00000441841 SPRYD3Q8NCJ5 442 aa16.55■□□□□ 0.24
LINC02243-201ENST00000441841 CIZ1Q9ULV3 898 aaPredicted RBP16.55■□□□□ 0.24
LINC02243-201ENST00000441841 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
LINC02243-201ENST00000441841 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
LINC02243-201ENST00000441841 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
LINC02243-201ENST00000441841 TSHZ2Q9NRE2 1034 aa16.44■□□□□ 0.22
LINC02243-201ENST00000441841 TPRNQ4KMQ1 711 aa16.33■□□□□ 0.2
LINC02243-201ENST00000441841 HS6ST3Q8IZP7 471 aa16.33■□□□□ 0.2
LINC02243-201ENST00000441841 GSE1Q14687 1217 aa16.29■□□□□ 0.2
LINC02243-201ENST00000441841 RNF25Q96BH1 459 aaPredicted RBP16.27■□□□□ 0.2
LINC02243-201ENST00000441841 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms