RNA–Protein interactions for RNA: ENST00000412309.6

MS4A6A-201, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2 BASIC

Gene MS4A6A, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-201ENST00000412309 AEBP2Q6ZN18 517 aaPredicted RBP34.36■■■■□ 3.09
MS4A6A-201ENST00000412309 CHIC1Q5VXU3 224 aa32.75■■■□□ 2.83
MS4A6A-201ENST00000412309 SENP3Q9H4L4 574 aaPredicted RBP29.22■■■□□ 2.27
MS4A6A-201ENST00000412309 PHF23Q9BUL5 403 aaPredicted RBP28.89■■■□□ 2.22
MS4A6A-201ENST00000412309 FOXD1Q16676 465 aa27.26■■□□□ 1.95
MS4A6A-201ENST00000412309 PLPPR3Q6T4P5 718 aa26.21■■□□□ 1.79
MS4A6A-201ENST00000412309 PPP6R1Q9UPN7 881 aa25.63■■□□□ 1.69
MS4A6A-201ENST00000412309 ADRA2BP18089 450 aa25.55■■□□□ 1.68
MS4A6A-201ENST00000412309 PIAS4Q8N2W9 510 aaPredicted RBP25.48■■□□□ 1.67
MS4A6A-201ENST00000412309 MSH5O43196 834 aa25.39■■□□□ 1.66
MS4A6A-201ENST00000412309 POTEDQ86YR6 584 aa24.56■■□□□ 1.52
MS4A6A-201ENST00000412309 MAPK8IP2Q13387 824 aaPredicted RBP23.43■■□□□ 1.34
MS4A6A-201ENST00000412309 SCAF1Q9H7N4 1312 aaKnown RBP23.3■■□□□ 1.32
MS4A6A-201ENST00000412309 DMRT2Q9Y5R5 561 aa23.22■■□□□ 1.31
MS4A6A-201ENST00000412309 PPP4R3CPQ6ZMV5 832 aa23.02■■□□□ 1.28
MS4A6A-201ENST00000412309 CNKSR2Q8WXI2 1034 aa22.54■■□□□ 1.2
MS4A6A-201ENST00000412309 HOXD11P31277 338 aaPredicted RBP22.44■■□□□ 1.18
MS4A6A-201ENST00000412309 RNF216Q9NWF9 866 aaPredicted RBP22.29■■□□□ 1.16
MS4A6A-201ENST00000412309 DCAF8L1A6NGE4 600 aa22.23■■□□□ 1.15
MS4A6A-201ENST00000412309 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.13
MS4A6A-201ENST00000412309 NPM3O75607 178 aaKnown RBP21.87■■□□□ 1.09
MS4A6A-201ENST00000412309 RNF39Q9H2S5 420 aa21.72■■□□□ 1.07
MS4A6A-201ENST00000412309 CACNB1Q02641 598 aaPredicted RBP21.71■■□□□ 1.07
MS4A6A-201ENST00000412309 KCNA4P22459 653 aa21.6■■□□□ 1.05
MS4A6A-201ENST00000412309 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
MS4A6A-201ENST00000412309 C1QBPQ07021 282 aaKnown RBP21.38■■□□□ 1.01
MS4A6A-201ENST00000412309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.34■■□□□ 1.01
MS4A6A-201ENST00000412309 U3KPZ7 1027 aaPredicted RBP20.96■□□□□ 0.95
MS4A6A-201ENST00000412309 SLC4A2P04920 1241 aa20.87■□□□□ 0.93
MS4A6A-201ENST00000412309 SPINK5Q9NQ38 1064 aaPredicted RBP20.61■□□□□ 0.89
MS4A6A-201ENST00000412309 CAPN15O75808 1086 aa20.53■□□□□ 0.88
MS4A6A-201ENST00000412309 DSG3P32926 999 aa20.4■□□□□ 0.86
MS4A6A-201ENST00000412309 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
MS4A6A-201ENST00000412309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
MS4A6A-201ENST00000412309 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
MS4A6A-201ENST00000412309 APLP2Q06481 763 aa20.3■□□□□ 0.84
MS4A6A-201ENST00000412309 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
MS4A6A-201ENST00000412309 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
MS4A6A-201ENST00000412309 MYCNP04198 464 aaPredicted RBP20.2■□□□□ 0.82
MS4A6A-201ENST00000412309 ZNF219Q9P2Y4 722 aaPredicted RBP20.19■□□□□ 0.82
MS4A6A-201ENST00000412309 ABCB7O75027 752 aa20.09■□□□□ 0.81
MS4A6A-201ENST00000412309 FOXD4L1Q9NU39 408 aa20.08■□□□□ 0.81
MS4A6A-201ENST00000412309 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
MS4A6A-201ENST00000412309 ZBTB22O15209 634 aa19.88■□□□□ 0.77
MS4A6A-201ENST00000412309 ATF5Q9Y2D1 282 aaPredicted RBP19.77■□□□□ 0.76
MS4A6A-201ENST00000412309 POLA2Q14181 598 aa19.74■□□□□ 0.75
MS4A6A-201ENST00000412309 ATXN8OSP0DMR3 200 aa19.43■□□□□ 0.7
MS4A6A-201ENST00000412309 RBM42Q9BTD8 480 aaKnown RBP19.41■□□□□ 0.7
MS4A6A-201ENST00000412309 ZBTB12Q9Y330 459 aaPredicted RBP19.31■□□□□ 0.68
MS4A6A-201ENST00000412309 POTEHQ6S545 545 aa19.27■□□□□ 0.68
MS4A6A-201ENST00000412309 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
MS4A6A-201ENST00000412309 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
MS4A6A-201ENST00000412309 AKT1S1Q96B36 256 aa19.02■□□□□ 0.64
MS4A6A-201ENST00000412309 CHRDL2Q6WN34 429 aa18.95■□□□□ 0.62
MS4A6A-201ENST00000412309 FBLN2P98095 1184 aa18.91■□□□□ 0.62
MS4A6A-201ENST00000412309 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
MS4A6A-201ENST00000412309 MKRN4PQ13434 485 aaPredicted RBP18.87■□□□□ 0.61
MS4A6A-201ENST00000412309 REM2Q8IYK8 340 aaPredicted RBP18.86■□□□□ 0.61
MS4A6A-201ENST00000412309 SPDYE2BA6NHP3 402 aa18.76■□□□□ 0.59
MS4A6A-201ENST00000412309 SPDYE6P0CI01 402 aa18.76■□□□□ 0.59
MS4A6A-201ENST00000412309 SPDYE2Q495Y8 402 aa18.76■□□□□ 0.59
MS4A6A-201ENST00000412309 PITPNM1O00562 1244 aa18.67■□□□□ 0.58
MS4A6A-201ENST00000412309 PIP4P2Q8N4L2 257 aa18.56■□□□□ 0.56
MS4A6A-201ENST00000412309 ZNF692Q9BU19 519 aaPredicted RBP18.55■□□□□ 0.56
MS4A6A-201ENST00000412309 SSUH2Q9Y2M2 353 aa18.55■□□□□ 0.56
MS4A6A-201ENST00000412309 FXR2P51116 673 aaKnown RBP eCLIP18.47■□□□□ 0.55
MS4A6A-201ENST00000412309 SPDYE1Q8NFV5 336 aaPredicted RBP18.38■□□□□ 0.53
MS4A6A-201ENST00000412309 CLEC11AQ9Y240 323 aa18.35■□□□□ 0.53
MS4A6A-201ENST00000412309 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
MS4A6A-201ENST00000412309 PRKAR2AP13861 404 aaKnown RBP18.17■□□□□ 0.5
MS4A6A-201ENST00000412309 HAX1O00165 279 aa18.14■□□□□ 0.49
MS4A6A-201ENST00000412309 SP7Q8TDD2 431 aaPredicted RBP18.13■□□□□ 0.49
MS4A6A-201ENST00000412309 PRR29P0C7W0 189 aa18.07■□□□□ 0.48
MS4A6A-201ENST00000412309 SPDYE4A6NLX3 237 aa18.02■□□□□ 0.48
MS4A6A-201ENST00000412309 CHADLQ6NUI6 762 aa18.02■□□□□ 0.48
MS4A6A-201ENST00000412309 EVX2Q03828 476 aa17.99■□□□□ 0.47
MS4A6A-201ENST00000412309 CCDC180Q9P1Z9 1646 aa17.97■□□□□ 0.47
MS4A6A-201ENST00000412309 C19orf67A6NJJ6 358 aa17.87■□□□□ 0.45
MS4A6A-201ENST00000412309 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
MS4A6A-201ENST00000412309 FARP1Q9Y4F1 1045 aaPredicted RBP17.75■□□□□ 0.43
MS4A6A-201ENST00000412309 CREBZFQ9NS37 354 aa17.7■□□□□ 0.42
MS4A6A-201ENST00000412309 PROM2Q8N271 834 aa17.63■□□□□ 0.41
MS4A6A-201ENST00000412309 CD44P16070 742 aaKnown RBP17.6■□□□□ 0.41
MS4A6A-201ENST00000412309 GABBR2O75899 941 aa17.57■□□□□ 0.4
MS4A6A-201ENST00000412309 ABCC9O60706 1549 aa17.46■□□□□ 0.39
MS4A6A-201ENST00000412309 MNX1P50219 401 aaPredicted RBP17.42■□□□□ 0.38
MS4A6A-201ENST00000412309 ZRANB1Q9UGI0 708 aa17.37■□□□□ 0.37
MS4A6A-201ENST00000412309 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
MS4A6A-201ENST00000412309 NPM1P06748 294 aaKnown RBP eCLIP17.32■□□□□ 0.36
MS4A6A-201ENST00000412309 FKBP8Q14318 412 aa17.29■□□□□ 0.36
MS4A6A-201ENST00000412309 CLCN6P51797 869 aa17.28■□□□□ 0.36
MS4A6A-201ENST00000412309 POTEIP0CG38 1075 aa17.23■□□□□ 0.35
MS4A6A-201ENST00000412309 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
MS4A6A-201ENST00000412309 PHF12Q96QT6 1004 aa17.17■□□□□ 0.34
MS4A6A-201ENST00000412309 MIER1Q8N108 512 aa17.15■□□□□ 0.34
MS4A6A-201ENST00000412309 GALR2O43603 387 aaPredicted RBP17.14■□□□□ 0.33
MS4A6A-201ENST00000412309 DCBLD2Q96PD2 775 aa17.09■□□□□ 0.33
MS4A6A-201ENST00000412309 PLEKHG5O94827 1062 aa17.07■□□□□ 0.32
MS4A6A-201ENST00000412309 TSPYL2Q9H2G4 693 aaPredicted RBP17.04■□□□□ 0.32
MS4A6A-201ENST00000412309 PLCD3Q8N3E9 789 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms