Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.53□□□□□ -0.08
WNT3P56703 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
WNT3P56703 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
WNT3P56703 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
WNT3P56703 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
WNT3P56703 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.52□□□□□ -0.08
WNT3P56703 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
WNT3P56703 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.52□□□□□ -0.08
WNT3P56703 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
WNT3P56703 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
WNT3P56703 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
WNT3P56703 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.52□□□□□ -0.09
WNT3P56703 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.52□□□□□ -0.09
WNT3P56703 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.52□□□□□ -0.09
WNT3P56703 FAM207CP-201ENST00000443486 507 ntBASIC14.52□□□□□ -0.09
WNT3P56703 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
WNT3P56703 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.52□□□□□ -0.09
WNT3P56703 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.52□□□□□ -0.09
WNT3P56703 AC092337.1-201ENST00000568699 1129 ntBASIC14.52□□□□□ -0.09
WNT3P56703 AC009407.1-201ENST00000568958 598 ntBASIC14.52□□□□□ -0.09
WNT3P56703 SAMD11P1-201ENST00000571429 661 ntBASIC14.52□□□□□ -0.09
WNT3P56703 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.52□□□□□ -0.09
WNT3P56703 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.52□□□□□ -0.09
WNT3P56703 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.52□□□□□ -0.09
WNT3P56703 AL391069.4-201ENST00000609583 481 ntBASIC14.52□□□□□ -0.09
WNT3P56703 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
WNT3P56703 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 NORAD-201ENST00000565493 5339 ntBASIC14.52□□□□□ -0.09
WNT3P56703 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
WNT3P56703 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
WNT3P56703 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
WNT3P56703 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.52□□□□□ -0.09
WNT3P56703 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
WNT3P56703 AC007787.1-201ENST00000588095 1583 ntBASIC14.51□□□□□ -0.09
WNT3P56703 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3P56703 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 LILRP1-201ENST00000444199 1370 ntBASIC14.51□□□□□ -0.09
WNT3P56703 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3P56703 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3P56703 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3P56703 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.51□□□□□ -0.09
WNT3P56703 AC114501.2-201ENST00000439631 535 ntBASIC14.51□□□□□ -0.09
WNT3P56703 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.51□□□□□ -0.09
WNT3P56703 GAPDHP40-201ENST00000505218 1006 ntBASIC14.51□□□□□ -0.09
WNT3P56703 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.51□□□□□ -0.09
WNT3P56703 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3P56703 AC190387.1-201ENST00000551683 408 ntBASIC14.51□□□□□ -0.09
WNT3P56703 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.51□□□□□ -0.09
WNT3P56703 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.51□□□□□ -0.09
WNT3P56703 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.51□□□□□ -0.09
WNT3P56703 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.51□□□□□ -0.09
WNT3P56703 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
WNT3P56703 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
WNT3P56703 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
WNT3P56703 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
WNT3P56703 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
WNT3P56703 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms