Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH11P55287 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH11P55287 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH11P55287 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDH11P55287 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.16□□□□□ -0.14
CDH11P55287 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH11P55287 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH11P55287 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH11P55287 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH11P55287 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH11P55287 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH11P55287 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 FOXO1B-201ENST00000504678 1527 ntBASIC14.15□□□□□ -0.14
CDH11P55287 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
CDH11P55287 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.15□□□□□ -0.14
CDH11P55287 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 AC097493.3-201ENST00000509725 367 ntBASIC14.15□□□□□ -0.14
CDH11P55287 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.15□□□□□ -0.14
CDH11P55287 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 GRK6P1-201ENST00000400595 1711 ntBASIC14.15□□□□□ -0.14
CDH11P55287 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDH11P55287 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH11P55287 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH11P55287 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH11P55287 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDH11P55287 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CDH11P55287 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.15□□□□□ -0.15
CDH11P55287 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
CDH11P55287 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH11P55287 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH11P55287 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH11P55287 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDH11P55287 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDH11P55287 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH11P55287 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDH11P55287 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH11P55287 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
CDH11P55287 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.14□□□□□ -0.15
CDH11P55287 SPDYE12P-201ENST00000618416 771 ntBASIC14.14□□□□□ -0.15
CDH11P55287 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CDH11P55287 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH11P55287 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CDH11P55287 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CDH11P55287 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms