Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
HMGA2P52926 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HMGA2P52926 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 AL354702.1-201ENST00000442006 1960 ntBASIC14□□□□□ -0.17
HMGA2P52926 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 AC018665.1-201ENST00000622927 1362 ntBASIC14□□□□□ -0.17
HMGA2P52926 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14□□□□□ -0.17
HMGA2P52926 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14□□□□□ -0.17
HMGA2P52926 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
HMGA2P52926 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14□□□□□ -0.17
HMGA2P52926 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HMGA2P52926 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.99□□□□□ -0.17
HMGA2P52926 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.99□□□□□ -0.17
HMGA2P52926 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HMGA2P52926 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.99□□□□□ -0.17
HMGA2P52926 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.99□□□□□ -0.17
HMGA2P52926 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HMGA2P52926 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HMGA2P52926 RPL37AP1-201ENST00000412502 279 ntBASIC13.99□□□□□ -0.17
HMGA2P52926 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.99□□□□□ -0.17
HMGA2P52926 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.99□□□□□ -0.17
HMGA2P52926 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
HMGA2P52926 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HMGA2P52926 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.99□□□□□ -0.17
HMGA2P52926 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.99□□□□□ -0.17
HMGA2P52926 KRT18P58-201ENST00000527480 1120 ntBASIC13.99□□□□□ -0.17
HMGA2P52926 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HMGA2P52926 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.99□□□□□ -0.17
HMGA2P52926 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
HMGA2P52926 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.99□□□□□ -0.17
HMGA2P52926 AC074044.1-201ENST00000609673 707 ntBASIC13.99□□□□□ -0.17
HMGA2P52926 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.99□□□□□ -0.17
HMGA2P52926 AP001059.3-201ENST00000619053 235 ntBASIC13.99□□□□□ -0.17
HMGA2P52926 AC009093.7-201ENST00000623853 1223 ntBASIC13.99□□□□□ -0.17
HMGA2P52926 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HMGA2P52926 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms