Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRM3P20309 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRM3P20309 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.36■□□□□ 0.05
CHRM3P20309 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
CHRM3P20309 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRM3P20309 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRM3P20309 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRM3P20309 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CHRM3P20309 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.36■□□□□ 0.05
CHRM3P20309 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CHRM3P20309 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHRM3P20309 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRM3P20309 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CHRM3P20309 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRM3P20309 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRM3P20309 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.35■□□□□ 0.05
CHRM3P20309 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
CHRM3P20309 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRM3P20309 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
CHRM3P20309 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CHRM3P20309 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CHRM3P20309 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
CHRM3P20309 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHRM3P20309 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.35■□□□□ 0.05
CHRM3P20309 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.35■□□□□ 0.05
CHRM3P20309 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRM3P20309 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.35■□□□□ 0.05
CHRM3P20309 AC092337.1-201ENST00000568699 1129 ntBASIC15.35■□□□□ 0.05
CHRM3P20309 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.35■□□□□ 0.05
CHRM3P20309 AC005498.2-205ENST00000593218 784 ntBASIC15.35■□□□□ 0.05
CHRM3P20309 AC025181.2-201ENST00000606994 802 ntBASIC15.35■□□□□ 0.05
CHRM3P20309 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.35■□□□□ 0.05
CHRM3P20309 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.35■□□□□ 0.05
CHRM3P20309 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.35■□□□□ 0.05
CHRM3P20309 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
CHRM3P20309 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHRM3P20309 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.34■□□□□ 0.05
CHRM3P20309 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.34■□□□□ 0.05
CHRM3P20309 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.34■□□□□ 0.05
CHRM3P20309 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.34■□□□□ 0.05
CHRM3P20309 SRD5A3P1-201ENST00000603021 949 ntBASIC15.34■□□□□ 0.05
CHRM3P20309 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 AC004840.1-201ENST00000636359 365 ntBASIC15.34■□□□□ 0.05
CHRM3P20309 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHRM3P20309 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
CHRM3P20309 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CHRM3P20309 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CHRM3P20309 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.34■□□□□ 0.05
CHRM3P20309 AGAP7P-201ENST00000582299 2062 ntBASIC15.34■□□□□ 0.05
CHRM3P20309 AGAP14-201ENST00000624701 2060 ntBASIC15.34■□□□□ 0.05
CHRM3P20309 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHRM3P20309 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHRM3P20309 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CHRM3P20309 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CHRM3P20309 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms