Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.54□□□□□ -0.24
ATF1P18846 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ATF1P18846 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
ATF1P18846 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.54□□□□□ -0.24
ATF1P18846 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
ATF1P18846 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.54□□□□□ -0.24
ATF1P18846 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ATF1P18846 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.53□□□□□ -0.24
ATF1P18846 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.53□□□□□ -0.24
ATF1P18846 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ATF1P18846 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.53□□□□□ -0.24
ATF1P18846 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.53□□□□□ -0.24
ATF1P18846 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.53□□□□□ -0.24
ATF1P18846 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ATF1P18846 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.53□□□□□ -0.24
ATF1P18846 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ATF1P18846 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.53□□□□□ -0.24
ATF1P18846 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.53□□□□□ -0.24
ATF1P18846 KRT18P32-201ENST00000424695 1287 ntBASIC13.53□□□□□ -0.24
ATF1P18846 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.53□□□□□ -0.24
ATF1P18846 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.53□□□□□ -0.24
ATF1P18846 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.53□□□□□ -0.24
ATF1P18846 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.53□□□□□ -0.24
ATF1P18846 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.53□□□□□ -0.24
ATF1P18846 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.53□□□□□ -0.24
ATF1P18846 AC018529.1-201ENST00000613063 361 ntBASIC13.53□□□□□ -0.24
ATF1P18846 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.53□□□□□ -0.24
ATF1P18846 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.53□□□□□ -0.24
ATF1P18846 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ATF1P18846 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
ATF1P18846 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.53□□□□□ -0.24
ATF1P18846 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
ATF1P18846 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ATF1P18846 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ATF1P18846 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATF1P18846 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ATF1P18846 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.52□□□□□ -0.24
ATF1P18846 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATF1P18846 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATF1P18846 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATF1P18846 ST20-AS1-201ENST00000560255 4223 ntBASIC13.52□□□□□ -0.24
ATF1P18846 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATF1P18846 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.52□□□□□ -0.24
ATF1P18846 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ATF1P18846 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ATF1P18846 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 SBF1P1-201ENST00000444527 5631 ntBASIC13.52□□□□□ -0.25
ATF1P18846 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.52□□□□□ -0.25
ATF1P18846 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.52□□□□□ -0.25
ATF1P18846 AL022342.1-201ENST00000400363 863 ntBASIC13.52□□□□□ -0.25
ATF1P18846 FO393414.2-201ENST00000405153 598 ntBASIC13.52□□□□□ -0.25
ATF1P18846 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.52□□□□□ -0.25
ATF1P18846 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.52□□□□□ -0.25
ATF1P18846 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.52□□□□□ -0.25
ATF1P18846 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.52□□□□□ -0.25
ATF1P18846 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.52□□□□□ -0.25
ATF1P18846 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
ATF1P18846 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.52□□□□□ -0.25
ATF1P18846 AC005829.1-201ENST00000570002 483 ntBASIC13.52□□□□□ -0.25
ATF1P18846 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
ATF1P18846 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.52□□□□□ -0.25
ATF1P18846 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.52□□□□□ -0.25
ATF1P18846 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.52□□□□□ -0.25
ATF1P18846 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATF1P18846 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.52□□□□□ -0.25
ATF1P18846 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.52□□□□□ -0.25
ATF1P18846 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms