Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
OPHN1O60890 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.13■□□□□ 0.17
OPHN1O60890 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
OPHN1O60890 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.13■□□□□ 0.17
OPHN1O60890 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
OPHN1O60890 PCDHA3-202ENST00000532566 4594 ntBASIC16.13■□□□□ 0.17
OPHN1O60890 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPHN1O60890 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.12■□□□□ 0.17
OPHN1O60890 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.12■□□□□ 0.17
OPHN1O60890 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.12■□□□□ 0.17
OPHN1O60890 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.12■□□□□ 0.17
OPHN1O60890 AL080243.2-201ENST00000418783 582 ntBASIC16.12■□□□□ 0.17
OPHN1O60890 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.12■□□□□ 0.17
OPHN1O60890 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.12■□□□□ 0.17
OPHN1O60890 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.12■□□□□ 0.17
OPHN1O60890 CHCHD2P3-201ENST00000603038 451 ntBASIC16.12■□□□□ 0.17
OPHN1O60890 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.12■□□□□ 0.17
OPHN1O60890 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.12■□□□□ 0.17
OPHN1O60890 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
OPHN1O60890 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
OPHN1O60890 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
OPHN1O60890 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.11■□□□□ 0.17
OPHN1O60890 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
OPHN1O60890 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.11■□□□□ 0.17
OPHN1O60890 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
OPHN1O60890 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.11■□□□□ 0.17
OPHN1O60890 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.11■□□□□ 0.17
OPHN1O60890 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.11■□□□□ 0.17
OPHN1O60890 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.11■□□□□ 0.17
OPHN1O60890 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.11■□□□□ 0.17
OPHN1O60890 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
OPHN1O60890 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.11■□□□□ 0.17
OPHN1O60890 WASH4P-201ENST00000564273 1246 ntBASIC16.11■□□□□ 0.17
OPHN1O60890 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.11■□□□□ 0.17
OPHN1O60890 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.11■□□□□ 0.17
OPHN1O60890 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.11■□□□□ 0.17
OPHN1O60890 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
OPHN1O60890 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
OPHN1O60890 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 MYO15B-237ENST00000642007 4893 ntBASIC16.11■□□□□ 0.17
OPHN1O60890 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
OPHN1O60890 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
OPHN1O60890 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
OPHN1O60890 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
OPHN1O60890 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms