Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC027020.2-201ENST00000602585 2389 ntBASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PCDHB19P-202ENST00000625133 2914 ntBASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.42□□□□□ -0.26
BOLA2-SMG1P6H3BVE0 PVRIG2P-201ENST00000435460 978 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms