Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 AC055876.3-201ENST00000431496 288 ntBASIC12.4□□□□□ -0.42
SRRM4A7MD48 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 AL589987.1-201ENST00000453380 819 ntBASIC12.4□□□□□ -0.42
SRRM4A7MD48 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 AC011467.4-201ENST00000594891 528 ntBASIC12.4□□□□□ -0.42
SRRM4A7MD48 AC138649.4-201ENST00000612222 287 ntBASIC12.4□□□□□ -0.42
SRRM4A7MD48 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.4□□□□□ -0.42
SRRM4A7MD48 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SRRM4A7MD48 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SRRM4A7MD48 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SRRM4A7MD48 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.4□□□□□ -0.43
SRRM4A7MD48 AC012508.2-201ENST00000567613 1472 ntBASIC12.4□□□□□ -0.43
SRRM4A7MD48 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
SRRM4A7MD48 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
SRRM4A7MD48 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SRRM4A7MD48 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SRRM4A7MD48 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SRRM4A7MD48 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SRRM4A7MD48 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
SRRM4A7MD48 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
SRRM4A7MD48 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 SPDYE18-201ENST00000510091 1050 ntBASIC12.39□□□□□ -0.43
SRRM4A7MD48 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 AL161772.1-201ENST00000610494 4412 ntBASIC12.39□□□□□ -0.43
SRRM4A7MD48 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 AC232323.1-201ENST00000540724 2099 ntBASIC12.39□□□□□ -0.43
SRRM4A7MD48 REXO1L5P-201ENST00000622260 2098 ntBASIC12.39□□□□□ -0.43
SRRM4A7MD48 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SRRM4A7MD48 BTBD7P1-201ENST00000447253 1453 ntBASIC12.39□□□□□ -0.43
SRRM4A7MD48 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.39□□□□□ -0.43
SRRM4A7MD48 AC007292.2-201ENST00000593524 1812 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms