Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP15Q9Y4E8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP15Q9Y4E8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 FAM86HP-204ENST00000513466 959 ntBASIC16.62■□□□□ 0.25
USP15Q9Y4E8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 AL049840.4-201ENST00000602422 811 ntBASIC16.62■□□□□ 0.25
USP15Q9Y4E8 AL022328.3-201ENST00000607943 679 ntBASIC16.62■□□□□ 0.25
USP15Q9Y4E8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 AC008687.7-202ENST00000637404 953 ntBASIC16.62■□□□□ 0.25
USP15Q9Y4E8 PCGF3-213ENST00000620529 1899 ntBASIC16.62■□□□□ 0.25
USP15Q9Y4E8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
USP15Q9Y4E8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 MIR326-201ENST00000362220 95 ntBASIC16.61■□□□□ 0.25
USP15Q9Y4E8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 CALR4P-201ENST00000431943 946 ntBASIC16.61■□□□□ 0.25
USP15Q9Y4E8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 AP001258.2-201ENST00000529891 490 ntBASIC16.61■□□□□ 0.25
USP15Q9Y4E8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 AC106872.11-201ENST00000605838 421 ntBASIC16.61■□□□□ 0.25
USP15Q9Y4E8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 LINC02447-202ENST00000501888 2146 ntBASIC16.61■□□□□ 0.25
USP15Q9Y4E8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.61■□□□□ 0.25
USP15Q9Y4E8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms