Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 FAM58DP-201ENST00000428076 619 ntBASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 AL512356.2-201ENST00000546955 174 ntBASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 BANF1P1-201ENST00000553684 263 ntBASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 HIST3H2BA-201ENST00000436555 524 ntBASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AC015911.4-201ENST00000588022 1070 ntBASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AP001059.3-201ENST00000619053 235 ntBASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
AMBRA1Q9C0C7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 REXO1L2P-201ENST00000425429 2069 ntBASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 AP001267.2-201ENST00000532619 2086 ntBASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.42□□□□□ -0.1
AMBRA1Q9C0C7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms