Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 AC117489.1-201ENST00000625169 3217 ntBASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 FAM8A3P-201ENST00000427218 844 ntBASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 RBPMS2P1-201ENST00000437762 623 ntBASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SMARCD3Q6STE5 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SMARCD3Q6STE5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms