Protein–RNA interactions for Protein: P28065

PSMB9, Proteasome subunit beta type-9, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB9P28065 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMB9P28065 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PSMB9P28065 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PSMB9P28065 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PSMB9P28065 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PSMB9P28065 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PSMB9P28065 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.02□□□□□ -0.16
PSMB9P28065 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PSMB9P28065 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PSMB9P28065 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.02□□□□□ -0.16
PSMB9P28065 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 AC027612.1-201ENST00000445234 2395 ntBASIC14.02□□□□□ -0.16
PSMB9P28065 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PSMB9P28065 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PSMB9P28065 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.02□□□□□ -0.17
PSMB9P28065 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.02□□□□□ -0.17
PSMB9P28065 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.02□□□□□ -0.17
PSMB9P28065 AC011467.4-201ENST00000594891 528 ntBASIC14.02□□□□□ -0.17
PSMB9P28065 AC008667.4-201ENST00000607370 168 ntBASIC14.02□□□□□ -0.17
PSMB9P28065 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.02□□□□□ -0.17
PSMB9P28065 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PSMB9P28065 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PSMB9P28065 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.02□□□□□ -0.17
PSMB9P28065 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PSMB9P28065 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 PPT1-213ENST00000641319 2388 ntBASIC14.02□□□□□ -0.17
PSMB9P28065 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PSMB9P28065 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PSMB9P28065 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PSMB9P28065 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PSMB9P28065 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 AL356585.2-201ENST00000625078 2396 ntBASIC14.01□□□□□ -0.17
PSMB9P28065 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
PSMB9P28065 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.01□□□□□ -0.17
PSMB9P28065 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PSMB9P28065 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.01□□□□□ -0.17
PSMB9P28065 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.01□□□□□ -0.17
PSMB9P28065 FAM185BP-201ENST00000443595 716 ntBASIC14.01□□□□□ -0.17
PSMB9P28065 DUX4L26-201ENST00000489078 1255 ntBASIC14.01□□□□□ -0.17
PSMB9P28065 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.01□□□□□ -0.17
PSMB9P28065 AL732292.2-201ENST00000609649 430 ntBASIC14.01□□□□□ -0.17
PSMB9P28065 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 AL645728.2-201ENST00000641974 660 ntBASIC14.01□□□□□ -0.17
PSMB9P28065 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
PSMB9P28065 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.01□□□□□ -0.17
PSMB9P28065 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.01□□□□□ -0.17
PSMB9P28065 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PSMB9P28065 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PSMB9P28065 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PSMB9P28065 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
PSMB9P28065 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms