Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP1P23763 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP1P23763 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VAMP1P23763 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.09□□□□□ -0.31
VAMP1P23763 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP1P23763 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP1P23763 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VAMP1P23763 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
VAMP1P23763 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.08□□□□□ -0.31
VAMP1P23763 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.31
VAMP1P23763 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
VAMP1P23763 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
VAMP1P23763 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.08□□□□□ -0.32
VAMP1P23763 AC005252.3-201ENST00000623855 2258 ntBASIC13.08□□□□□ -0.32
VAMP1P23763 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 AC211429.1-201ENST00000415277 523 ntBASIC13.08□□□□□ -0.32
VAMP1P23763 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.08□□□□□ -0.32
VAMP1P23763 RN7SL279P-201ENST00000582185 284 ntBASIC13.08□□□□□ -0.32
VAMP1P23763 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.08□□□□□ -0.32
VAMP1P23763 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
VAMP1P23763 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.08□□□□□ -0.32
VAMP1P23763 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
VAMP1P23763 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VAMP1P23763 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VAMP1P23763 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VAMP1P23763 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
VAMP1P23763 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VAMP1P23763 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VAMP1P23763 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 LINC01583-202ENST00000558082 2568 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.07□□□□□ -0.32
VAMP1P23763 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.07□□□□□ -0.32
VAMP1P23763 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VAMP1P23763 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.07□□□□□ -0.32
VAMP1P23763 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.07□□□□□ -0.32
VAMP1P23763 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.07□□□□□ -0.32
VAMP1P23763 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
VAMP1P23763 TMPOP1-202ENST00000424642 1267 ntBASIC13.07□□□□□ -0.32
VAMP1P23763 KRT18P27-201ENST00000427733 1299 ntBASIC13.07□□□□□ -0.32
VAMP1P23763 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.07□□□□□ -0.32
VAMP1P23763 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.07□□□□□ -0.32
VAMP1P23763 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 CXCL1P1-201ENST00000502804 216 ntBASIC13.07□□□□□ -0.32
VAMP1P23763 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.07□□□□□ -0.32
VAMP1P23763 AC021087.4-201ENST00000563761 564 ntBASIC13.07□□□□□ -0.32
VAMP1P23763 NPAP1P7-201ENST00000613027 823 ntBASIC13.07□□□□□ -0.32
VAMP1P23763 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 FP325330.2-201ENST00000624219 5630 ntBASIC13.07□□□□□ -0.32
VAMP1P23763 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.07□□□□□ -0.32
VAMP1P23763 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.07□□□□□ -0.32
VAMP1P23763 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
VAMP1P23763 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VAMP1P23763 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VAMP1P23763 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.07□□□□□ -0.32
VAMP1P23763 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms