Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 NPM1-207ENST00000521260 510 ntTSL 25.05□□□□□ -1.66e-14■□□□□ 9.8
RPS3P23396 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.97□□□□□ -1.612e-6■□□□□ 9.8
RPS3P23396 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.635e-10■□□□□ 9.8
RPS3P23396 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.85□□□□□ -1.632e-6■□□□□ 9.8
RPS3P23396 GMDS-207ENST00000530459 520 ntTSL 34.84□□□□□ -1.631e-8■□□□□ 9.8
RPS3P23396 CTAGE5-209ENST00000553383 1010 ntTSL 24.11□□□□□ -1.752e-6■□□□□ 9.8
RPS3P23396 CDH2-205ENST00000430882 610 ntTSL 43.41□□□□□ -1.862e-6■□□□□ 9.8
RPS3P23396 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.872e-6■□□□□ 9.8
RPS3P23396 NPM1-210ENST00000523339 268 ntTSL 23.37□□□□□ -1.876e-14■□□□□ 9.8
RPS3P23396 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.33□□□□□ -1.882e-6■□□□□ 9.8
RPS3P23396 MBNL3-210ENST00000465964 400 ntTSL 22.76□□□□□ -1.972e-6■□□□□ 9.8
RPS3P23396 ACADSB-203ENST00000411816 512 ntTSL 32.24□□□□□ -2.051e-8■□□□□ 9.8
RPS3P23396 GMDS-206ENST00000530075 402 ntTSL 20.82□□□□□ -2.281e-8■□□□□ 9.8
RPS3P23396 OBSL1-212ENST00000491370 584 ntTSL 417.77■□□□□ 0.445e-7■□□□□ 9.8
RPS3P23396 ITIH2-205ENST00000477751 591 ntTSL 21.98□□□□□ -2.091e-38■□□□□ 9.8
RPS3P23396 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.86■□□□□ 0.931e-7■□□□□ 9.8
RPS3P23396 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.16□□□□□ -0.37e-18■□□□□ 9.8
RPS3P23396 NONO-206ENST00000420903 622 ntTSL 36.11□□□□□ -1.437e-18■□□□□ 9.8
RPS3P23396 BTF3-207ENST00000512257 887 ntTSL 1 (best)18.02■□□□□ 0.484e-13■□□□□ 9.8
RPS3P23396 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.061e-11■□□□□ 9.8
RPS3P23396 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.166e-9■□□□□ 9.8
RPS3P23396 NASP-219ENST00000530840 531 ntTSL 511.58□□□□□ -0.563e-7■□□□□ 9.8
RPS3P23396 NASP-225ENST00000629893 253 ntTSL 5 BASIC11.36□□□□□ -0.593e-7■□□□□ 9.8
RPS3P23396 ANPEP-208ENST00000560030 896 ntTSL 514.37□□□□□ -0.112e-12■□□□□ 9.8
RPS3P23396 ANPEP-202ENST00000558177 918 ntTSL 38.13□□□□□ -1.112e-12■□□□□ 9.8
RPS3P23396 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.542e-6■□□□□ 9.8
RPS3P23396 LTBP4-204ENST00000318809 1700 ntTSL 217.3■□□□□ 0.362e-6■□□□□ 9.8
RPS3P23396 LTBP4-212ENST00000595118 2446 ntTSL 217.16■□□□□ 0.342e-6■□□□□ 9.8
RPS3P23396 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.332e-6■□□□□ 9.8
RPS3P23396 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.212e-6■□□□□ 9.8
RPS3P23396 LTBP4-229ENST00000601032 2019 ntTSL 1 (best)16.18■□□□□ 0.182e-6■□□□□ 9.8
RPS3P23396 LTBP4-202ENST00000243562 3140 ntTSL 213.79□□□□□ -0.22e-6■□□□□ 9.8
RPS3P23396 SNHG16-208ENST00000591956 556 ntTSL 211.17□□□□□ -0.622e-40■□□□□ 9.8
RPS3P23396 SNHG16-204ENST00000586942 568 ntTSL 4 BASIC10.17□□□□□ -0.782e-40■□□□□ 9.8
RPS3P23396 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC9.76□□□□□ -0.852e-40■□□□□ 9.8
RPS3P23396 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC9.54□□□□□ -0.882e-40■□□□□ 9.8
RPS3P23396 SNHG16-202ENST00000493536 2424 ntTSL 1 (best)8.72□□□□□ -1.012e-40■□□□□ 9.8
RPS3P23396 SNHG16-206ENST00000587838 884 ntTSL 33.86□□□□□ -1.792e-40■□□□□ 9.8
RPS3P23396 SNORD1B-201ENST00000363091 84 ntBASIC-2.65□□□□□ -2.832e-40■□□□□ 9.8
RPS3P23396 P3H1-209ENST00000462474 581 ntTSL 212.65□□□□□ -0.388e-7■□□□□ 9.8
RPS3P23396 FASN-203ENST00000579410 424 ntTSL 29.53□□□□□ -0.885e-24■□□□□ 9.8
RPS3P23396 TNFRSF10B-206ENST00000520109 674 ntTSL 218.49■□□□□ 0.551e-6■□□□□ 9.7
RPS3P23396 TNFRSF10B-208ENST00000523752 3328 ntTSL 1 (best)7.79□□□□□ -1.161e-6■□□□□ 9.7
RPS3P23396 DAG1-213ENST00000466701 364 ntTSL 417.58■□□□□ 0.42e-8■□□□□ 9.7
RPS3P23396 DAG1-217ENST00000496474 539 ntTSL 415.45■□□□□ 0.062e-8■□□□□ 9.7
RPS3P23396 DAG1-212ENST00000461987 372 ntTSL 315.33■□□□□ 0.042e-8■□□□□ 9.7
RPS3P23396 AKAP1-207ENST00000572156 710 ntTSL 515.58■□□□□ 0.083e-7■□□□□ 9.7
RPS3P23396 AKAP1-213ENST00000574683 588 ntTSL 215.58■□□□□ 0.083e-7■□□□□ 9.7
RPS3P23396 AKAP1-210ENST00000572814 532 ntTSL 411.35□□□□□ -0.593e-7■□□□□ 9.7
RPS3P23396 SPTAN1-213ENST00000627809 342 ntTSL 37.85□□□□□ -1.154e-18■□□□□ 9.7
RPS3P23396 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC9.45□□□□□ -0.91e-6■□□□□ 9.7
RPS3P23396 PRKAB1-207ENST00000542698 4019 ntTSL 1 (best)7.92□□□□□ -1.144e-6■□□□□ 9.7
RPS3P23396 PSME2-207ENST00000559056 512 ntTSL 57.9□□□□□ -1.141e-6■□□□□ 9.7
RPS3P23396 CDK12-209ENST00000584632 4165 ntTSL 513.05□□□□□ -0.322e-8■□□□□ 9.7
RPS3P23396 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.461e-7■□□□□ 9.7
RPS3P23396 CENPV-206ENST00000584214 735 ntTSL 222.6■■□□□ 1.211e-7■□□□□ 9.7
RPS3P23396 CENPV-203ENST00000476243 1770 ntTSL 521.2■□□□□ 0.991e-7■□□□□ 9.7
RPS3P23396 CENPV-205ENST00000582062 557 ntTSL 416.76■□□□□ 0.271e-7■□□□□ 9.7
RPS3P23396 PEG3-207ENST00000599534 5115 ntAPPRIS P1 TSL 1 (best)12.76□□□□□ -0.371e-9■□□□□ 9.7
RPS3P23396 ZIM2-203ENST00000595671 2054 ntTSL 1 (best)12.53□□□□□ -0.41e-9■□□□□ 9.7
RPS3P23396 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.911e-9■□□□□ 9.7
RPS3P23396 ZIM2-205ENST00000597281 2037 ntTSL 1 (best)8.18□□□□□ -1.11e-9■□□□□ 9.7
RPS3P23396 FGFR4-210ENST00000508139 720 ntTSL 516.41■□□□□ 0.229e-13■□□□□ 9.7
RPS3P23396 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.157e-28■□□□□ 9.7
RPS3P23396 NOP58-203ENST00000433543 714 ntTSL 33.02□□□□□ -1.937e-28■□□□□ 9.7
RPS3P23396 SNORD11-201ENST00000459124 84 ntBASIC-0.84□□□□□ -2.547e-28■□□□□ 9.7
RPS3P23396 SLC2A3-208ENST00000541671 590 ntTSL 211.61□□□□□ -0.551e-7■□□□□ 9.7
RPS3P23396 RPS18-236ENST00000490191 996 ntTSL 214.94□□□□□ -0.026e-14■□□□□ 9.7
RPS3P23396 RPS18-230ENST00000439602 613 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.66e-14■□□□□ 9.7
RPS3P23396 RPS18-233ENST00000474973 589 ntTSL 2 BASIC11.28□□□□□ -0.66e-14■□□□□ 9.7
RPS3P23396 RPS18-234ENST00000476222 685 ntTSL 1 (best)11.28□□□□□ -0.66e-14■□□□□ 9.7
RPS3P23396 RPS18-231ENST00000472218 1109 ntTSL 210.77□□□□□ -0.694e-15■□□□□ 9.7
RPS3P23396 RPS18-232ENST00000474626 639 ntTSL 39.96□□□□□ -0.826e-14■□□□□ 9.7
RPS3P23396 RPS18-237ENST00000496813 642 ntTSL 29.96□□□□□ -0.826e-14■□□□□ 9.7
RPS3P23396 RAVER1-202ENST00000585935 470 ntTSL 317.76■□□□□ 0.434e-8■□□□□ 9.7
RPS3P23396 RAVER1-205ENST00000593136 500 ntTSL 513.03□□□□□ -0.324e-8■□□□□ 9.7
RPS3P23396 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.57□□□□□ -0.081e-11■□□□□ 9.7
RPS3P23396 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.211e-11■□□□□ 9.7
RPS3P23396 HBA2-203ENST00000482565 640 ntTSL 1 (best)17.08■□□□□ 0.324e-70■□□□□ 9.7
RPS3P23396 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.284e-70■□□□□ 9.7
RPS3P23396 HBA2-202ENST00000397806 513 ntTSL 2 BASIC11.01□□□□□ -0.654e-70■□□□□ 9.7
RPS3P23396 PICALM-215ENST00000531558 565 ntTSL 525.21■■□□□ 1.637e-25■□□□□ 9.7
RPS3P23396 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.47■■□□□ 1.351e-8■□□□□ 9.7
RPS3P23396 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.271e-8■□□□□ 9.7
RPS3P23396 PICALM-218ENST00000532041 699 ntTSL 322.25■■□□□ 1.157e-25■□□□□ 9.7
RPS3P23396 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.3■□□□□ 0.21e-8■□□□□ 9.7
RPS3P23396 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.11e-8■□□□□ 9.7
RPS3P23396 PICALM-210ENST00000528411 586 ntTSL 514.56□□□□□ -0.087e-25■□□□□ 9.7
RPS3P23396 PICALM-203ENST00000525162 548 ntTSL 47.47□□□□□ -1.217e-25■□□□□ 9.7
RPS3P23396 PICALM-208ENST00000528256 563 ntTSL 44.99□□□□□ -1.617e-25■□□□□ 9.7
RPS3P23396 PICALM-217ENST00000531930 703 ntTSL 52.45□□□□□ -2.027e-25■□□□□ 9.7
RPS3P23396 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.59□□□□□ -2.151e-8■□□□□ 9.7
RPS3P23396 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.522e-6■□□□□ 9.7
RPS3P23396 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.642e-6■□□□□ 9.7
RPS3P23396 EEF2-204ENST00000598182 581 ntTSL 212.99□□□□□ -0.333e-39■□□□□ 9.7
RPS3P23396 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.354e-13■□□□□ 9.7
RPS3P23396 PDIA5-207ENST00000489923 1651 ntTSL 1 (best)22.89■■□□□ 1.257e-9■□□□□ 9.7
RPS3P23396 LARP1-208ENST00000518892 399 ntTSL 320.69■□□□□ 0.91e-6■□□□□ 9.7
RPS3P23396 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.587e-9■□□□□ 9.7
RPS3P23396 LARP1-202ENST00000517616 501 ntTSL 51.43□□□□□ -2.181e-6■□□□□ 9.7
Retrieved 100 of 24,271 protein–RNA pairs in 348.6 ms