RNA–Protein interactions for RNA: ENST00000530459.1

GMDS-207, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-207ENST00000530459 CHIC1Q5VXU3 224 aa11.09□□□□□ -0.63
GMDS-207ENST00000530459 AEBP2Q6ZN18 517 aaPredicted RBP10.82□□□□□ -0.68
GMDS-207ENST00000530459 PHF23Q9BUL5 403 aaPredicted RBP9.79□□□□□ -0.84
GMDS-207ENST00000530459 NISCHQ9Y2I1 1504 aa9.36□□□□□ -0.91
GMDS-207ENST00000530459 PLPPR3Q6T4P5 718 aa9.26□□□□□ -0.93
GMDS-207ENST00000530459 SENP3Q9H4L4 574 aaPredicted RBP9.13□□□□□ -0.95
GMDS-207ENST00000530459 EHMT2Q96KQ7 1210 aa8.76□□□□□ -1.01
GMDS-207ENST00000530459 ADRA2BP18089 450 aa8.64□□□□□ -1.03
GMDS-207ENST00000530459 KCNA4P22459 653 aa8.64□□□□□ -1.03
GMDS-207ENST00000530459 HRCP23327 699 aa8.52□□□□□ -1.05
GMDS-207ENST00000530459 PELP1Q8IZL8 1130 aaKnown RBP8.5□□□□□ -1.05
GMDS-207ENST00000530459 PPP6R1Q9UPN7 881 aa8.47□□□□□ -1.05
GMDS-207ENST00000530459 FOXD1Q16676 465 aa8.39□□□□□ -1.07
GMDS-207ENST00000530459 SLC4A1APQ9BWU0 796 aaKnown RBP8.35□□□□□ -1.07
GMDS-207ENST00000530459 CSRNP3Q8WYN3 585 aa8.33□□□□□ -1.08
GMDS-207ENST00000530459 MYT1Q01538 1121 aa8.27□□□□□ -1.09
GMDS-207ENST00000530459 PPP4R3CPQ6ZMV5 832 aa8.22□□□□□ -1.09
GMDS-207ENST00000530459 DCAF1Q9Y4B6 1507 aa8.22□□□□□ -1.09
GMDS-207ENST00000530459 NCBP3Q53F19 620 aaKnown RBP8.18□□□□□ -1.1
GMDS-207ENST00000530459 MYO15BQ96JP2 1530 aa8.15□□□□□ -1.1
GMDS-207ENST00000530459 PCGF6Q9BYE7 350 aa8.13□□□□□ -1.11
GMDS-207ENST00000530459 CCDC180Q9P1Z9 1646 aa8.12□□□□□ -1.11
GMDS-207ENST00000530459 PPARGC1BQ86YN6 1023 aaKnown RBP8.1□□□□□ -1.11
GMDS-207ENST00000530459 ZEB1P37275 1124 aaPredicted RBP8.09□□□□□ -1.11
GMDS-207ENST00000530459 PIAS4Q8N2W9 510 aaPredicted RBP8.09□□□□□ -1.11
GMDS-207ENST00000530459 NPM3O75607 178 aaKnown RBP8.04□□□□□ -1.12
GMDS-207ENST00000530459 SUPT5HO00267 1087 aaKnown RBP8.02□□□□□ -1.13
GMDS-207ENST00000530459 TRIM26Q12899 539 aaPredicted RBP8.02□□□□□ -1.13
GMDS-207ENST00000530459 SCAF1Q9H7N4 1312 aaKnown RBP8.02□□□□□ -1.13
GMDS-207ENST00000530459 ZCCHC6Q5VYS8 1495 aaKnown RBP8.01□□□□□ -1.13
GMDS-207ENST00000530459 SHROOM4Q9ULL8 1493 aa7.99□□□□□ -1.13
GMDS-207ENST00000530459 POTEDQ86YR6 584 aa7.97□□□□□ -1.13
GMDS-207ENST00000530459 ZBTB22O15209 634 aa7.95□□□□□ -1.14
GMDS-207ENST00000530459 SLC24A1O60721 1099 aa7.94□□□□□ -1.14
GMDS-207ENST00000530459 CNKSR2Q8WXI2 1034 aa7.88□□□□□ -1.15
GMDS-207ENST00000530459 ACIN1Q9UKV3 1341 aaKnown RBP7.87□□□□□ -1.15
GMDS-207ENST00000530459 TTBK1Q5TCY1 1321 aaPredicted RBP7.85□□□□□ -1.15
GMDS-207ENST00000530459 AMER1Q5JTC6 1135 aaPredicted RBP7.81□□□□□ -1.16
GMDS-207ENST00000530459 FOXD4L1Q9NU39 408 aa7.81□□□□□ -1.16
GMDS-207ENST00000530459 RTN4Q9NQC3 1192 aaKnown RBP7.8□□□□□ -1.16
GMDS-207ENST00000530459 LOC105371045A0A1W2PR82 267 aa7.78□□□□□ -1.16
GMDS-207ENST00000530459 CENPBP07199 599 aaPredicted RBP7.77□□□□□ -1.17
GMDS-207ENST00000530459 NEUROD1Q13562 356 aa7.76□□□□□ -1.17
GMDS-207ENST00000530459 GTF3C3Q9Y5Q9 886 aa7.71□□□□□ -1.18
GMDS-207ENST00000530459 DNAJC5BQ9UF47 199 aa7.66□□□□□ -1.18
GMDS-207ENST00000530459 DIEXFQ68CQ4 756 aaKnown RBP7.63□□□□□ -1.19
GMDS-207ENST00000530459 ABCC9O60706 1549 aa7.62□□□□□ -1.19
GMDS-207ENST00000530459 CLSPNQ9HAW4 1339 aa7.62□□□□□ -1.19
GMDS-207ENST00000530459 TRIM41Q8WV44 630 aa7.62□□□□□ -1.19
GMDS-207ENST00000530459 RNF216Q9NWF9 866 aaPredicted RBP7.58□□□□□ -1.2
GMDS-207ENST00000530459 MAPK8IP2Q13387 824 aaPredicted RBP7.56□□□□□ -1.2
GMDS-207ENST00000530459 FKBP8Q14318 412 aa7.55□□□□□ -1.2
GMDS-207ENST00000530459 RB1CC1Q8TDY2 1594 aa7.54□□□□□ -1.2
GMDS-207ENST00000530459 WRNQ14191 1432 aaPredicted RBP eCLIP7.54□□□□□ -1.2
GMDS-207ENST00000530459 MSH5O43196 834 aa7.54□□□□□ -1.2
GMDS-207ENST00000530459 ZNF316A6NFI3 1004 aaPredicted RBP7.53□□□□□ -1.2
GMDS-207ENST00000530459 CCER1Q8TC90 406 aaPredicted RBP7.53□□□□□ -1.2
GMDS-207ENST00000530459 RSF1Q96T23 1441 aaPredicted RBP7.52□□□□□ -1.21
GMDS-207ENST00000530459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.49□□□□□ -1.21
GMDS-207ENST00000530459 ANP32EQ9BTT0 268 aa7.48□□□□□ -1.21
GMDS-207ENST00000530459 ATXN8OSP0DMR3 200 aa7.46□□□□□ -1.22
GMDS-207ENST00000530459 BCL11AQ9H165 835 aa7.46□□□□□ -1.22
GMDS-207ENST00000530459 MYCNP04198 464 aaPredicted RBP7.44□□□□□ -1.22
GMDS-207ENST00000530459 SLC4A2P04920 1241 aa7.44□□□□□ -1.22
GMDS-207ENST00000530459 MIER1Q8N108 512 aa7.4□□□□□ -1.22
GMDS-207ENST00000530459 HOXD11P31277 338 aaPredicted RBP7.39□□□□□ -1.23
GMDS-207ENST00000530459 EIF4G1Q04637 1599 aaKnown RBP7.38□□□□□ -1.23
GMDS-207ENST00000530459 TSHZ2Q9NRE2 1034 aa7.38□□□□□ -1.23
GMDS-207ENST00000530459 SUPT16HQ9Y5B9 1047 aaKnown RBP7.38□□□□□ -1.23
GMDS-207ENST00000530459 FAM9AQ8IZU1 332 aaPredicted RBP7.37□□□□□ -1.23
GMDS-207ENST00000530459 TNIKQ9UKE5 1360 aa7.36□□□□□ -1.23
GMDS-207ENST00000530459 DCAF8L2P0C7V8 631 aa7.36□□□□□ -1.23
GMDS-207ENST00000530459 DMRT2Q9Y5R5 561 aa7.35□□□□□ -1.23
GMDS-207ENST00000530459 EEA1Q15075 1411 aa7.35□□□□□ -1.23
GMDS-207ENST00000530459 CEP162Q5TB80 1403 aa7.33□□□□□ -1.24
GMDS-207ENST00000530459 YTHDC1Q96MU7 727 aaKnown RBP7.32□□□□□ -1.24
GMDS-207ENST00000530459 BAZ1AQ9NRL2 1556 aaPredicted RBP7.29□□□□□ -1.24
GMDS-207ENST00000530459 MYT1LQ9UL68 1186 aa7.27□□□□□ -1.25
GMDS-207ENST00000530459 SCRIBQ14160 1630 aa7.25□□□□□ -1.25
GMDS-207ENST00000530459 MROH2BQ7Z745 1585 aa7.25□□□□□ -1.25
GMDS-207ENST00000530459 ERICH6Q7L0X2 663 aa7.23□□□□□ -1.25
GMDS-207ENST00000530459 GOLGA3Q08378 1498 aa7.23□□□□□ -1.25
GMDS-207ENST00000530459 PRKCSHP14314 528 aaPredicted RBP7.21□□□□□ -1.26
GMDS-207ENST00000530459 WIZO95785 1651 aa7.21□□□□□ -1.26
GMDS-207ENST00000530459 KIF21BO75037 1637 aa7.2□□□□□ -1.26
GMDS-207ENST00000530459 FANCIQ9NVI1 1328 aa7.2□□□□□ -1.26
GMDS-207ENST00000530459 CCDC88BA6NC98 1476 aa7.19□□□□□ -1.26
GMDS-207ENST00000530459 CECR2Q9BXF3 1484 aa7.19□□□□□ -1.26
GMDS-207ENST00000530459 RBM19Q9Y4C8 960 aaKnown RBP7.19□□□□□ -1.26
GMDS-207ENST00000530459 NACADO15069 1562 aa7.19□□□□□ -1.26
GMDS-207ENST00000530459 CUX2O14529 1486 aa7.18□□□□□ -1.26
GMDS-207ENST00000530459 TOP2AP11388 1531 aaKnown RBP7.18□□□□□ -1.26
GMDS-207ENST00000530459 DHX57Q6P158 1386 aaKnown RBP7.18□□□□□ -1.26
GMDS-207ENST00000530459 VPS8Q8N3P4 1428 aa7.18□□□□□ -1.26
GMDS-207ENST00000530459 BAZ1BQ9UIG0 1483 aaKnown RBP7.17□□□□□ -1.26
GMDS-207ENST00000530459 PLCB2Q00722 1185 aa7.17□□□□□ -1.26
GMDS-207ENST00000530459 ATF5Q9Y2D1 282 aaPredicted RBP7.17□□□□□ -1.26
GMDS-207ENST00000530459 ABCC8Q09428 1581 aa7.16□□□□□ -1.26
GMDS-207ENST00000530459 CEP164Q9UPV0 1460 aa7.16□□□□□ -1.26
GMDS-207ENST00000530459 SOGA1O94964 1423 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms