RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 AEBP2Q6ZN18 517 aaPredicted RBP27.07■■□□□ 1.92
GMDS-206ENST00000530075 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
GMDS-206ENST00000530075 PHF23Q9BUL5 403 aaPredicted RBP23.41■■□□□ 1.34
GMDS-206ENST00000530075 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
GMDS-206ENST00000530075 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
GMDS-206ENST00000530075 FOXD1Q16676 465 aa21.25■□□□□ 0.99
GMDS-206ENST00000530075 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
GMDS-206ENST00000530075 ADRA2BP18089 450 aa20.6■□□□□ 0.89
GMDS-206ENST00000530075 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
GMDS-206ENST00000530075 MSH5O43196 834 aa19.42■□□□□ 0.7
GMDS-206ENST00000530075 PPP4R3CPQ6ZMV5 832 aa19.05■□□□□ 0.64
GMDS-206ENST00000530075 KCNA4P22459 653 aa18.84■□□□□ 0.61
GMDS-206ENST00000530075 SCAF1Q9H7N4 1312 aaKnown RBP18.68■□□□□ 0.58
GMDS-206ENST00000530075 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
GMDS-206ENST00000530075 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
GMDS-206ENST00000530075 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
GMDS-206ENST00000530075 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
GMDS-206ENST00000530075 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
GMDS-206ENST00000530075 RNF216Q9NWF9 866 aaPredicted RBP18.04■□□□□ 0.48
GMDS-206ENST00000530075 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
GMDS-206ENST00000530075 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
GMDS-206ENST00000530075 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
GMDS-206ENST00000530075 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
GMDS-206ENST00000530075 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
GMDS-206ENST00000530075 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
GMDS-206ENST00000530075 ZBTB22O15209 634 aa17.38■□□□□ 0.37
GMDS-206ENST00000530075 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
GMDS-206ENST00000530075 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
GMDS-206ENST00000530075 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
GMDS-206ENST00000530075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.331e-6■■■□□ 17.2
GMDS-206ENST00000530075 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
GMDS-206ENST00000530075 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
GMDS-206ENST00000530075 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
GMDS-206ENST00000530075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
GMDS-206ENST00000530075 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
GMDS-206ENST00000530075 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
GMDS-206ENST00000530075 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
GMDS-206ENST00000530075 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
GMDS-206ENST00000530075 C1QBPQ07021 282 aaKnown RBP16.48■□□□□ 0.23
GMDS-206ENST00000530075 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
GMDS-206ENST00000530075 APLP2Q06481 763 aa16.33■□□□□ 0.2
GMDS-206ENST00000530075 CAPN15O75808 1086 aa16.26■□□□□ 0.19
GMDS-206ENST00000530075 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
GMDS-206ENST00000530075 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
GMDS-206ENST00000530075 CACNB1Q02641 598 aaPredicted RBP16.15■□□□□ 0.18
GMDS-206ENST00000530075 POLA2Q14181 598 aa16.03■□□□□ 0.16
GMDS-206ENST00000530075 ABCB7O75027 752 aa16.02■□□□□ 0.16
GMDS-206ENST00000530075 DSG3P32926 999 aa15.98■□□□□ 0.15
GMDS-206ENST00000530075 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
GMDS-206ENST00000530075 FBLN2P98095 1184 aa15.68■□□□□ 0.1
GMDS-206ENST00000530075 FKBP8Q14318 412 aa15.65■□□□□ 0.1
GMDS-206ENST00000530075 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
GMDS-206ENST00000530075 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
GMDS-206ENST00000530075 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
GMDS-206ENST00000530075 ZNF692Q9BU19 519 aaPredicted RBP15.29■□□□□ 0.04
GMDS-206ENST00000530075 SPDYE2BA6NHP3 402 aa15.28■□□□□ 0.04
GMDS-206ENST00000530075 SPDYE6P0CI01 402 aa15.28■□□□□ 0.04
GMDS-206ENST00000530075 SPDYE2Q495Y8 402 aa15.28■□□□□ 0.04
GMDS-206ENST00000530075 PROM2Q8N271 834 aa15.25■□□□□ 0.03
GMDS-206ENST00000530075 SSUH2Q9Y2M2 353 aa15.23■□□□□ 0.03
GMDS-206ENST00000530075 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
GMDS-206ENST00000530075 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
GMDS-206ENST00000530075 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
GMDS-206ENST00000530075 FBXO3Q9UK99 471 aa14.95□□□□□ -0.02
GMDS-206ENST00000530075 REM2Q8IYK8 340 aaPredicted RBP14.91□□□□□ -0.02
GMDS-206ENST00000530075 VASPP50552 380 aaPredicted RBP14.81□□□□□ -0.04
GMDS-206ENST00000530075 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
GMDS-206ENST00000530075 SPDYE1Q8NFV5 336 aaPredicted RBP14.79□□□□□ -0.04
GMDS-206ENST00000530075 CLEC11AQ9Y240 323 aa14.77□□□□□ -0.05
GMDS-206ENST00000530075 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
GMDS-206ENST00000530075 IFNLR1Q8IU57 520 aaPredicted RBP14.68□□□□□ -0.06
GMDS-206ENST00000530075 MIER1Q8N108 512 aa14.65□□□□□ -0.06
GMDS-206ENST00000530075 PRR29P0C7W0 189 aa14.64□□□□□ -0.07
GMDS-206ENST00000530075 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
GMDS-206ENST00000530075 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
GMDS-206ENST00000530075 CREBZFQ9NS37 354 aa14.54□□□□□ -0.08
GMDS-206ENST00000530075 KLHL34Q8N239 644 aa14.51□□□□□ -0.09
GMDS-206ENST00000530075 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
GMDS-206ENST00000530075 AMER1Q5JTC6 1135 aaPredicted RBP14.45□□□□□ -0.1
GMDS-206ENST00000530075 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
GMDS-206ENST00000530075 PLEKHG5O94827 1062 aa14.44□□□□□ -0.1
GMDS-206ENST00000530075 MNX1P50219 401 aaPredicted RBP14.44□□□□□ -0.1
GMDS-206ENST00000530075 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
GMDS-206ENST00000530075 SPOCK2Q92563 424 aa14.4□□□□□ -0.1
GMDS-206ENST00000530075 PIP4P2Q8N4L2 257 aa14.38□□□□□ -0.11
GMDS-206ENST00000530075 PRKAR2AP13861 404 aaKnown RBP14.37□□□□□ -0.11
GMDS-206ENST00000530075 ZBTB47Q9UFB7 747 aaPredicted RBP14.37□□□□□ -0.11
GMDS-206ENST00000530075 NUBP1P53384 320 aa14.29□□□□□ -0.12
GMDS-206ENST00000530075 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
GMDS-206ENST00000530075 PKD2Q13563 968 aa14.25□□□□□ -0.13
GMDS-206ENST00000530075 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
GMDS-206ENST00000530075 NPM1P06748 294 aaKnown RBP eCLIP14.19□□□□□ -0.14
GMDS-206ENST00000530075 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
GMDS-206ENST00000530075 DCAF8Q5TAQ9 597 aa14.13□□□□□ -0.15
GMDS-206ENST00000530075 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
GMDS-206ENST00000530075 GSE1Q14687 1217 aa14.08□□□□□ -0.16
GMDS-206ENST00000530075 FAM212AQ96EL1 285 aa14.08□□□□□ -0.16
GMDS-206ENST00000530075 TSPYL2Q9H2G4 693 aaPredicted RBP14.07□□□□□ -0.16
GMDS-206ENST00000530075 RGL2O15211 777 aa13.99□□□□□ -0.17
GMDS-206ENST00000530075 PYGBP11216 843 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms