Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBB4AP04350 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TUBB4AP04350 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TUBB4AP04350 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TUBB4AP04350 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
TUBB4AP04350 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.52■□□□□ 0.24
TUBB4AP04350 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBB4AP04350 FAAHP1-202ENST00000446499 1238 ntBASIC16.52■□□□□ 0.24
TUBB4AP04350 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TUBB4AP04350 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.52■□□□□ 0.24
TUBB4AP04350 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TUBB4AP04350 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.52■□□□□ 0.24
TUBB4AP04350 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.52■□□□□ 0.24
TUBB4AP04350 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.52■□□□□ 0.24
TUBB4AP04350 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBB4AP04350 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB4AP04350 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.52■□□□□ 0.23
TUBB4AP04350 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
TUBB4AP04350 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB4AP04350 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB4AP04350 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB4AP04350 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB4AP04350 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB4AP04350 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.52■□□□□ 0.23
TUBB4AP04350 AC015909.5-201ENST00000624336 2266 ntBASIC16.52■□□□□ 0.23
TUBB4AP04350 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TUBB4AP04350 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBB4AP04350 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
TUBB4AP04350 TCAM1P-207ENST00000485295 1537 ntBASIC16.51■□□□□ 0.23
TUBB4AP04350 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBB4AP04350 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBB4AP04350 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 INE2-201ENST00000630399 1874 ntBASIC16.51■□□□□ 0.23
TUBB4AP04350 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBB4AP04350 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBB4AP04350 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 AC105233.2-201ENST00000523697 349 ntBASIC16.51■□□□□ 0.23
TUBB4AP04350 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TUBB4AP04350 AF228730.5-201ENST00000530288 346 ntBASIC16.51■□□□□ 0.23
TUBB4AP04350 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.51■□□□□ 0.23
TUBB4AP04350 AC105339.3-201ENST00000560043 636 ntBASIC16.51■□□□□ 0.23
TUBB4AP04350 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TUBB4AP04350 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.51■□□□□ 0.23
TUBB4AP04350 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBB4AP04350 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
TUBB4AP04350 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
TUBB4AP04350 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBB4AP04350 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBB4AP04350 REXO1L4P-201ENST00000605109 1937 ntBASIC16.51■□□□□ 0.23
TUBB4AP04350 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB4AP04350 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB4AP04350 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBB4AP04350 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBB4AP04350 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB4AP04350 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TUBB4AP04350 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB4AP04350 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB4AP04350 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB4AP04350 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB4AP04350 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBB4AP04350 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB4AP04350 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TUBB4AP04350 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TUBB4AP04350 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TUBB4AP04350 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TUBB4AP04350 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.5■□□□□ 0.23
TUBB4AP04350 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms