Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
TRGV3P03979 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV3P03979 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV3P03979 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV3P03979 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV3P03979 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 AL353779.1-201ENST00000434793 351 ntBASIC12.15□□□□□ -0.46
TRGV3P03979 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.15□□□□□ -0.46
TRGV3P03979 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV3P03979 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 RN7SL399P-201ENST00000471648 279 ntBASIC12.15□□□□□ -0.46
TRGV3P03979 FAM86LP-201ENST00000478302 853 ntBASIC12.15□□□□□ -0.46
TRGV3P03979 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.15□□□□□ -0.46
TRGV3P03979 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 RRP7BP-205ENST00000566851 833 ntBASIC12.15□□□□□ -0.46
TRGV3P03979 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.15□□□□□ -0.46
TRGV3P03979 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.15□□□□□ -0.46
TRGV3P03979 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TRGV3P03979 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV3P03979 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRGV3P03979 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV3P03979 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV3P03979 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV3P03979 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV3P03979 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV3P03979 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV3P03979 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV3P03979 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV3P03979 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.15□□□□□ -0.47
TRGV3P03979 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV3P03979 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
TRGV3P03979 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV3P03979 CLK3P2-201ENST00000427566 1453 ntBASIC12.14□□□□□ -0.47
TRGV3P03979 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV3P03979 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV3P03979 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TRGV3P03979 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV3P03979 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
TRGV3P03979 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 RPL13AP25-201ENST00000484130 612 ntBASIC12.14□□□□□ -0.47
TRGV3P03979 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV3P03979 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
TRGV3P03979 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
TRGV3P03979 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV3P03979 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV3P03979 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV3P03979 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms