Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CCSER1Q9C0I3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 LINC02228-204ENST00000642115 2962 ntBASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 TERF1P3-201ENST00000505638 1227 ntBASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AL359711.2-201ENST00000563105 872 ntBASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AC138761.1-201ENST00000584393 385 ntBASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AL390755.1-201ENST00000623716 2027 ntBASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.17■□□□□ 0.34
CCSER1Q9C0I3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 REXO1L5P-201ENST00000622260 2098 ntBASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 C1QBPP1-201ENST00000400117 770 ntBASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 BX539320.1-201ENST00000623759 877 ntBASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCSER1Q9C0I3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 FER1L4-210ENST00000615531 5998 ntBASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCSER1Q9C0I3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms