Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
COL27A1Q8IZC6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 KRT18P66-201ENST00000452970 1269 ntBASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 AP000358.1-201ENST00000456260 156 ntBASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 MIR4522-201ENST00000584932 87 ntBASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 AC005632.3-201ENST00000605544 308 ntBASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 AL365203.3-201ENST00000609742 2057 ntBASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 TMBIM7P-202ENST00000641474 1516 ntBASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 FRMPD2B-201ENST00000431305 1347 ntBASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 AC026471.1-201ENST00000564629 3026 ntBASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 MROH4P-201ENST00000431302 1578 ntBASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL27A1Q8IZC6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
COL27A1Q8IZC6 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
COL27A1Q8IZC6 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 MIR557-201ENST00000385239 98 ntBASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 MRPL22P1-201ENST00000505398 616 ntBASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 DUTP3-201ENST00000450025 415 ntBASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 FTH1P22-201ENST00000456305 520 ntBASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 RPL18AP3-201ENST00000462885 528 ntBASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 MIR6756-201ENST00000616240 63 ntBASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.08□□□□□ -0.16
COL27A1Q8IZC6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms