Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 AC073869.1-201ENST00000415574 2762 ntBASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 AC068760.1-201ENST00000493579 1953 ntBASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LYSMD2Q8IV50 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 RNU1-129P-201ENST00000384064 167 ntBASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 FGFR3P6-201ENST00000457012 610 ntBASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 U1.21-201ENST00000580816 167 ntBASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 MIR4515-201ENST00000584082 81 ntBASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 AC011467.4-201ENST00000594891 528 ntBASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.57□□□□□ -0.24
LYSMD2Q8IV50 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms