Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 AC004461.1-201ENST00000412461 403 ntBASIC14.04□□□□□ -0.16
HMGA2P52926 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
HMGA2P52926 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGA2P52926 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGA2P52926 SERBP1P3-201ENST00000459980 809 ntBASIC14.04□□□□□ -0.16
HMGA2P52926 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGA2P52926 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGA2P52926 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGA2P52926 SAMD11P1-201ENST00000571429 661 ntBASIC14.04□□□□□ -0.16
HMGA2P52926 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
HMGA2P52926 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGA2P52926 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.04□□□□□ -0.16
HMGA2P52926 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 AL359881.3-201ENST00000602640 1721 ntBASIC14.04□□□□□ -0.16
HMGA2P52926 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
HMGA2P52926 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGA2P52926 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGA2P52926 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGA2P52926 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
HMGA2P52926 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HMGA2P52926 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HMGA2P52926 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
HMGA2P52926 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HMGA2P52926 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 AL080243.2-201ENST00000418783 582 ntBASIC14.03□□□□□ -0.16
HMGA2P52926 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGA2P52926 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGA2P52926 CEND1P1-201ENST00000451006 455 ntBASIC14.03□□□□□ -0.16
HMGA2P52926 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGA2P52926 MIR4453-201ENST00000584019 89 ntBASIC14.03□□□□□ -0.16
HMGA2P52926 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 AC000095.1-201ENST00000603208 874 ntBASIC14.03□□□□□ -0.16
HMGA2P52926 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGA2P52926 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGA2P52926 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGA2P52926 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGA2P52926 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HMGA2P52926 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGA2P52926 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGA2P52926 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGA2P52926 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGA2P52926 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGA2P52926 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGA2P52926 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HMGA2P52926 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HMGA2P52926 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGA2P52926 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms