Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 AC068587.6-202ENST00000641839 5619 ntBASIC16.05■□□□□ 0.16
MMP13P45452 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MMP13P45452 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP13P45452 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP13P45452 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP13P45452 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MMP13P45452 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP13P45452 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP13P45452 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MMP13P45452 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 SLED1-202ENST00000512051 380 ntBASIC16.05■□□□□ 0.16
MMP13P45452 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MMP13P45452 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP13P45452 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.05■□□□□ 0.16
MMP13P45452 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.05■□□□□ 0.16
MMP13P45452 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.05■□□□□ 0.16
MMP13P45452 LINC01115-203ENST00000606068 577 ntBASIC16.05■□□□□ 0.16
MMP13P45452 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.05■□□□□ 0.16
MMP13P45452 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.05■□□□□ 0.16
MMP13P45452 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MMP13P45452 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 BTBD7P1-201ENST00000447253 1453 ntBASIC16.04■□□□□ 0.16
MMP13P45452 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.04■□□□□ 0.16
MMP13P45452 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MMP13P45452 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP13P45452 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP13P45452 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.04■□□□□ 0.16
MMP13P45452 INGX-202ENST00000489074 768 ntBASIC16.04■□□□□ 0.16
MMP13P45452 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP13P45452 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP13P45452 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP13P45452 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP13P45452 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP13P45452 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.04■□□□□ 0.16
MMP13P45452 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.04■□□□□ 0.16
MMP13P45452 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 AC008738.7-201ENST00000609744 511 ntBASIC16.04■□□□□ 0.16
MMP13P45452 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.04■□□□□ 0.16
MMP13P45452 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.04■□□□□ 0.16
MMP13P45452 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP13P45452 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MMP13P45452 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.04■□□□□ 0.16
MMP13P45452 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MMP13P45452 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MMP13P45452 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 CICP14-201ENST00000629111 2732 ntBASIC16.03■□□□□ 0.16
MMP13P45452 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.03■□□□□ 0.16
MMP13P45452 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
MMP13P45452 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MMP13P45452 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.03■□□□□ 0.16
MMP13P45452 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.03■□□□□ 0.16
MMP13P45452 AC114501.2-201ENST00000439631 535 ntBASIC16.03■□□□□ 0.16
MMP13P45452 RPL13P2-201ENST00000440687 659 ntBASIC16.03■□□□□ 0.16
MMP13P45452 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MMP13P45452 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.03■□□□□ 0.16
MMP13P45452 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms