Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR1P43307 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR1P43307 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR1P43307 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SSR1P43307 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 FO393414.2-201ENST00000405153 598 ntBASIC16.49■□□□□ 0.23
SSR1P43307 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SSR1P43307 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 AC136604.1-201ENST00000418535 575 ntBASIC16.49■□□□□ 0.23
SSR1P43307 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 AL079307.3-201ENST00000556114 283 ntBASIC16.49■□□□□ 0.23
SSR1P43307 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR1P43307 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SSR1P43307 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 LINC00628-201ENST00000628516 1289 ntBASIC16.49■□□□□ 0.23
SSR1P43307 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.49■□□□□ 0.23
SSR1P43307 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR1P43307 CETN4P-206ENST00000642099 2168 ntBASIC16.49■□□□□ 0.23
SSR1P43307 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SSR1P43307 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.49■□□□□ 0.23
SSR1P43307 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.49■□□□□ 0.23
SSR1P43307 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR1P43307 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.49■□□□□ 0.23
SSR1P43307 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSR1P43307 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.49■□□□□ 0.23
SSR1P43307 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SSR1P43307 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.48■□□□□ 0.23
SSR1P43307 AC138969.2-201ENST00000532739 9932 ntBASIC16.48■□□□□ 0.23
SSR1P43307 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.48■□□□□ 0.23
SSR1P43307 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.48■□□□□ 0.23
SSR1P43307 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.48■□□□□ 0.23
SSR1P43307 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.48■□□□□ 0.23
SSR1P43307 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.48■□□□□ 0.23
SSR1P43307 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SSR1P43307 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
SSR1P43307 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.48■□□□□ 0.23
SSR1P43307 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SSR1P43307 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 KRT8P12-202ENST00000472924 1397 ntBASIC16.48■□□□□ 0.23
SSR1P43307 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SSR1P43307 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.48■□□□□ 0.23
SSR1P43307 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSR1P43307 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.47■□□□□ 0.23
SSR1P43307 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSR1P43307 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SSR1P43307 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SSR1P43307 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.47■□□□□ 0.23
SSR1P43307 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 SPDYE17-201ENST00000412399 783 ntBASIC16.47■□□□□ 0.23
SSR1P43307 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.47■□□□□ 0.23
SSR1P43307 HIST3H2BA-201ENST00000436555 524 ntBASIC16.47■□□□□ 0.23
SSR1P43307 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.47■□□□□ 0.23
SSR1P43307 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SSR1P43307 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.47■□□□□ 0.23
SSR1P43307 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.47■□□□□ 0.23
SSR1P43307 AC027612.4-201ENST00000605371 583 ntBASIC16.47■□□□□ 0.23
SSR1P43307 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSR1P43307 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms