Protein–RNA interactions for Protein: P04553

PRM1, Sperm protamine P1, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRM1P04553 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC3.68□□□□□ -1.82
PRM1P04553 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC3.68□□□□□ -1.82
PRM1P04553 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PRM1P04553 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PRM1P04553 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
PRM1P04553 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC3.68□□□□□ -1.82
PRM1P04553 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
PRM1P04553 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
PRM1P04553 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PRM1P04553 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 AL357054.4-201ENST00000606285 2814 ntBASIC3.67□□□□□ -1.82
PRM1P04553 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC3.67□□□□□ -1.82
PRM1P04553 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 HERC2P9-206ENST00000529624 5187 ntBASIC3.67□□□□□ -1.82
PRM1P04553 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC3.67□□□□□ -1.82
PRM1P04553 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 ACE3P-201ENST00000423435 1973 ntBASIC3.67□□□□□ -1.82
PRM1P04553 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 AC016397.2-201ENST00000624848 1985 ntBASIC3.67□□□□□ -1.82
PRM1P04553 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PRM1P04553 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 SRRT-216ENST00000618262 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC3.67□□□□□ -1.82
PRM1P04553 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC3.67□□□□□ -1.82
PRM1P04553 AC006277.1-201ENST00000624348 1610 ntBASIC3.67□□□□□ -1.82
PRM1P04553 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PRM1P04553 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 AC125807.2-201ENST00000513358 3514 ntBASIC3.67□□□□□ -1.82
PRM1P04553 AC092028.1-202ENST00000641483 3547 ntBASIC3.67□□□□□ -1.82
PRM1P04553 AC092028.1-201ENST00000641781 3540 ntBASIC3.67□□□□□ -1.82
PRM1P04553 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC3.67□□□□□ -1.82
PRM1P04553 PBX1-212ENST00000540236 6175 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PRM1P04553 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PRM1P04553 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms