RNA–Protein interactions for RNA: ENST00000230381.6

PRPH2-201, Transcript of peripherin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPH2, Length 2,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2-201ENST00000230381 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
PRPH2-201ENST00000230381 CCDC180Q9P1Z9 1646 aa20.57■□□□□ 0.88
PRPH2-201ENST00000230381 PELP1Q8IZL8 1130 aaKnown RBP20.33■□□□□ 0.85
PRPH2-201ENST00000230381 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
PRPH2-201ENST00000230381 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
PRPH2-201ENST00000230381 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
PRPH2-201ENST00000230381 MYT1Q01538 1121 aa19.8■□□□□ 0.76
PRPH2-201ENST00000230381 ABCC9O60706 1549 aa19.78■□□□□ 0.76
PRPH2-201ENST00000230381 HRCP23327 699 aa19.41■□□□□ 0.7
PRPH2-201ENST00000230381 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
PRPH2-201ENST00000230381 PPARGC1BQ86YN6 1023 aaKnown RBP19.37■□□□□ 0.69
PRPH2-201ENST00000230381 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
PRPH2-201ENST00000230381 NACADO15069 1562 aa19.27■□□□□ 0.68
PRPH2-201ENST00000230381 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.67
PRPH2-201ENST00000230381 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
PRPH2-201ENST00000230381 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
PRPH2-201ENST00000230381 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
PRPH2-201ENST00000230381 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
PRPH2-201ENST00000230381 PRKCSHP14314 528 aaPredicted RBP19.09■□□□□ 0.65
PRPH2-201ENST00000230381 LOC105371045A0A1W2PR82 267 aa18.93■□□□□ 0.62
PRPH2-201ENST00000230381 TTBK1Q5TCY1 1321 aaPredicted RBP18.83■□□□□ 0.61
PRPH2-201ENST00000230381 BCL11AQ9H165 835 aa18.83■□□□□ 0.61
PRPH2-201ENST00000230381 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.6
PRPH2-201ENST00000230381 FAM9AQ8IZU1 332 aaPredicted RBP18.7■□□□□ 0.58
PRPH2-201ENST00000230381 BICRAQ9NZM4 1560 aa18.62■□□□□ 0.57
PRPH2-201ENST00000230381 TRIM26Q12899 539 aaPredicted RBP18.57■□□□□ 0.56
PRPH2-201ENST00000230381 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
PRPH2-201ENST00000230381 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
PRPH2-201ENST00000230381 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
PRPH2-201ENST00000230381 PABPN1Q86U42 306 aaKnown RBP eCLIP18.41■□□□□ 0.54
PRPH2-201ENST00000230381 GTF3C3Q9Y5Q9 886 aa18.34■□□□□ 0.53
PRPH2-201ENST00000230381 RSF1Q96T23 1441 aaPredicted RBP18.33■□□□□ 0.52
PRPH2-201ENST00000230381 ERICH6Q7L0X2 663 aa18.3■□□□□ 0.52
PRPH2-201ENST00000230381 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
PRPH2-201ENST00000230381 ACIN1Q9UKV3 1341 aaKnown RBP18.24■□□□□ 0.51
PRPH2-201ENST00000230381 CENPBP07199 599 aaPredicted RBP18.24■□□□□ 0.51
PRPH2-201ENST00000230381 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
PRPH2-201ENST00000230381 APLP2Q06481 763 aa18.19■□□□□ 0.5
PRPH2-201ENST00000230381 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
PRPH2-201ENST00000230381 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
PRPH2-201ENST00000230381 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
PRPH2-201ENST00000230381 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
PRPH2-201ENST00000230381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
PRPH2-201ENST00000230381 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
PRPH2-201ENST00000230381 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
PRPH2-201ENST00000230381 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
PRPH2-201ENST00000230381 ANP32EQ9BTT0 268 aa17.88■□□□□ 0.45
PRPH2-201ENST00000230381 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
PRPH2-201ENST00000230381 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
PRPH2-201ENST00000230381 WIZO95785 1651 aa17.79■□□□□ 0.44
PRPH2-201ENST00000230381 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
PRPH2-201ENST00000230381 SMARCA2P51531 1590 aa17.75■□□□□ 0.43
PRPH2-201ENST00000230381 SLC24A1O60721 1099 aa17.75■□□□□ 0.43
PRPH2-201ENST00000230381 NCAPD3P42695 1498 aa17.74■□□□□ 0.43
PRPH2-201ENST00000230381 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
PRPH2-201ENST00000230381 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
PRPH2-201ENST00000230381 ANO8Q9HCE9 1232 aaPredicted RBP17.68■□□□□ 0.42
PRPH2-201ENST00000230381 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
PRPH2-201ENST00000230381 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
PRPH2-201ENST00000230381 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
PRPH2-201ENST00000230381 CCDC88BA6NC98 1476 aa17.58■□□□□ 0.41
PRPH2-201ENST00000230381 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
PRPH2-201ENST00000230381 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
PRPH2-201ENST00000230381 CEP162Q5TB80 1403 aa17.54■□□□□ 0.4
PRPH2-201ENST00000230381 SOGA1O94964 1423 aa17.53■□□□□ 0.4
PRPH2-201ENST00000230381 RANGAP1P46060 587 aaPredicted RBP17.46■□□□□ 0.38
PRPH2-201ENST00000230381 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
PRPH2-201ENST00000230381 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
PRPH2-201ENST00000230381 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
PRPH2-201ENST00000230381 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
PRPH2-201ENST00000230381 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
PRPH2-201ENST00000230381 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
PRPH2-201ENST00000230381 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
PRPH2-201ENST00000230381 PLEKHG5O94827 1062 aa17.39■□□□□ 0.37
PRPH2-201ENST00000230381 ZNF316A6NFI3 1004 aaPredicted RBP17.37■□□□□ 0.37
PRPH2-201ENST00000230381 TSHZ2Q9NRE2 1034 aa17.29■□□□□ 0.36
PRPH2-201ENST00000230381 LAMC3Q9Y6N6 1575 aa17.29■□□□□ 0.36
PRPH2-201ENST00000230381 EEA1Q15075 1411 aa17.28■□□□□ 0.36
PRPH2-201ENST00000230381 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
PRPH2-201ENST00000230381 GOLGA3Q08378 1498 aa17.27■□□□□ 0.35
PRPH2-201ENST00000230381 MIER1Q8N108 512 aa17.22■□□□□ 0.35
PRPH2-201ENST00000230381 CLIP1P30622 1438 aa17.18■□□□□ 0.34
PRPH2-201ENST00000230381 UBE2Q2Q8WVN8 375 aa17.17■□□□□ 0.34
PRPH2-201ENST00000230381 CADPSQ9ULU8 1353 aa17.16■□□□□ 0.34
PRPH2-201ENST00000230381 NESP48681 1621 aa17.14■□□□□ 0.33
PRPH2-201ENST00000230381 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
PRPH2-201ENST00000230381 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
PRPH2-201ENST00000230381 CFTRP13569 1480 aa17.12■□□□□ 0.33
PRPH2-201ENST00000230381 PDS5BQ9NTI5 1447 aa17.1■□□□□ 0.33
PRPH2-201ENST00000230381 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.09■□□□□ 0.33
PRPH2-201ENST00000230381 ERCC6Q03468 1493 aa17.07■□□□□ 0.32
PRPH2-201ENST00000230381 DAXXQ9UER7 740 aaPredicted RBP17.06■□□□□ 0.32
PRPH2-201ENST00000230381 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
PRPH2-201ENST00000230381 KIF21AQ7Z4S6 1674 aa17.06■□□□□ 0.32
PRPH2-201ENST00000230381 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
PRPH2-201ENST00000230381 RAPGEF2Q9Y4G8 1499 aa17.04■□□□□ 0.32
PRPH2-201ENST00000230381 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.31
PRPH2-201ENST00000230381 THOC2Q8NI27 1593 aaKnown RBP17.01■□□□□ 0.31
PRPH2-201ENST00000230381 CUX2O14529 1486 aa17.01■□□□□ 0.31
PRPH2-201ENST00000230381 PODXL2Q9NZ53 605 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms