RNA–Protein interactions for RNA: ENST00000276925.6

CDKN2B-201, Transcript of cyclin dependent kinase inhibitor 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2B, Length 3,911 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2B-201ENST00000276925 NISCHQ9Y2I1 1504 aa24.76■■□□□ 1.55
CDKN2B-201ENST00000276925 SHROOM4Q9ULL8 1493 aa22.46■■□□□ 1.19
CDKN2B-201ENST00000276925 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
CDKN2B-201ENST00000276925 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
CDKN2B-201ENST00000276925 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
CDKN2B-201ENST00000276925 PCGF6Q9BYE7 350 aa21.04■□□□□ 0.96
CDKN2B-201ENST00000276925 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
CDKN2B-201ENST00000276925 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
CDKN2B-201ENST00000276925 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
CDKN2B-201ENST00000276925 ZCCHC6Q5VYS8 1495 aaKnown RBP20.85■□□□□ 0.93
CDKN2B-201ENST00000276925 PPARGC1BQ86YN6 1023 aaKnown RBP20.76■□□□□ 0.91
CDKN2B-201ENST00000276925 FAM9AQ8IZU1 332 aaPredicted RBP20.69■□□□□ 0.9
CDKN2B-201ENST00000276925 HRCP23327 699 aa20.65■□□□□ 0.9
CDKN2B-201ENST00000276925 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
CDKN2B-201ENST00000276925 TRIM41Q8WV44 630 aa20.31■□□□□ 0.84
CDKN2B-201ENST00000276925 TTBK1Q5TCY1 1321 aaPredicted RBP20.21■□□□□ 0.83
CDKN2B-201ENST00000276925 TRIM26Q12899 539 aaPredicted RBP20.11■□□□□ 0.81
CDKN2B-201ENST00000276925 SCRIBQ14160 1630 aa20.04■□□□□ 0.8
CDKN2B-201ENST00000276925 ABCC9O60706 1549 aa19.99■□□□□ 0.79
CDKN2B-201ENST00000276925 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.77
CDKN2B-201ENST00000276925 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
CDKN2B-201ENST00000276925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
CDKN2B-201ENST00000276925 CECR2Q9BXF3 1484 aa19.71■□□□□ 0.75
CDKN2B-201ENST00000276925 RB1CC1Q8TDY2 1594 aa19.7■□□□□ 0.74
CDKN2B-201ENST00000276925 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
CDKN2B-201ENST00000276925 CCER1Q8TC90 406 aaPredicted RBP19.65■□□□□ 0.74
CDKN2B-201ENST00000276925 ZEB1P37275 1124 aaPredicted RBP19.56■□□□□ 0.72
CDKN2B-201ENST00000276925 PABPN1Q86U42 306 aaKnown RBP eCLIP19.56■□□□□ 0.72
CDKN2B-201ENST00000276925 UBTFP17480 764 aaKnown RBP19.53■□□□□ 0.72
CDKN2B-201ENST00000276925 MROH2BQ7Z745 1585 aa19.48■□□□□ 0.71
CDKN2B-201ENST00000276925 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
CDKN2B-201ENST00000276925 WIZO95785 1651 aa19.35■□□□□ 0.69
CDKN2B-201ENST00000276925 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
CDKN2B-201ENST00000276925 HNRNPUL2Q1KMD3 747 aaKnown RBP19.31■□□□□ 0.68
CDKN2B-201ENST00000276925 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
CDKN2B-201ENST00000276925 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
CDKN2B-201ENST00000276925 CENPBP07199 599 aaPredicted RBP19.18■□□□□ 0.66
CDKN2B-201ENST00000276925 DIEXFQ68CQ4 756 aaKnown RBP19.18■□□□□ 0.66
CDKN2B-201ENST00000276925 SOGA1O94964 1423 aa19.17■□□□□ 0.66
CDKN2B-201ENST00000276925 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
CDKN2B-201ENST00000276925 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
CDKN2B-201ENST00000276925 NACADO15069 1562 aa19.13■□□□□ 0.65
CDKN2B-201ENST00000276925 NEUROD1Q13562 356 aa19.12■□□□□ 0.65
CDKN2B-201ENST00000276925 RUSC2Q8N2Y8 1516 aa19.07■□□□□ 0.64
CDKN2B-201ENST00000276925 APLP2Q06481 763 aa19.06■□□□□ 0.64
CDKN2B-201ENST00000276925 CEP162Q5TB80 1403 aa19.04■□□□□ 0.64
CDKN2B-201ENST00000276925 GTF3C3Q9Y5Q9 886 aa19.02■□□□□ 0.64
CDKN2B-201ENST00000276925 ACIN1Q9UKV3 1341 aaKnown RBP18.97■□□□□ 0.63
CDKN2B-201ENST00000276925 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
CDKN2B-201ENST00000276925 ITGAEP38570 1179 aa18.95■□□□□ 0.62
CDKN2B-201ENST00000276925 UNC13AQ9UPW8 1703 aa18.9■□□□□ 0.62
CDKN2B-201ENST00000276925 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.61
CDKN2B-201ENST00000276925 EIF4G1Q04637 1599 aaKnown RBP18.82■□□□□ 0.6
CDKN2B-201ENST00000276925 TNIKQ9UKE5 1360 aa18.8■□□□□ 0.6
CDKN2B-201ENST00000276925 MIER1Q8N108 512 aa18.79■□□□□ 0.6
CDKN2B-201ENST00000276925 WRNQ14191 1432 aaPredicted RBP eCLIP18.78■□□□□ 0.6
CDKN2B-201ENST00000276925 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.6
CDKN2B-201ENST00000276925 ATP1B4Q9UN42 357 aaPredicted RBP18.77■□□□□ 0.6
CDKN2B-201ENST00000276925 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
CDKN2B-201ENST00000276925 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
CDKN2B-201ENST00000276925 CLIP1P30622 1438 aa18.71■□□□□ 0.59
CDKN2B-201ENST00000276925 GOLGA3Q08378 1498 aa18.68■□□□□ 0.58
CDKN2B-201ENST00000276925 MYT1Q01538 1121 aa18.66■□□□□ 0.58
CDKN2B-201ENST00000276925 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
CDKN2B-201ENST00000276925 KANK4Q5T7N3 995 aaPredicted RBP18.59■□□□□ 0.57
CDKN2B-201ENST00000276925 RAPGEF2Q9Y4G8 1499 aa18.57■□□□□ 0.56
CDKN2B-201ENST00000276925 EEA1Q15075 1411 aa18.53■□□□□ 0.56
CDKN2B-201ENST00000276925 BAZ1BQ9UIG0 1483 aaKnown RBP18.53■□□□□ 0.56
CDKN2B-201ENST00000276925 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
CDKN2B-201ENST00000276925 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
CDKN2B-201ENST00000276925 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
CDKN2B-201ENST00000276925 FAM50AQ14320 339 aaKnown RBP18.44■□□□□ 0.54
CDKN2B-201ENST00000276925 HIRIP3Q9BW71 556 aaPredicted RBP18.44■□□□□ 0.54
CDKN2B-201ENST00000276925 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
CDKN2B-201ENST00000276925 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
CDKN2B-201ENST00000276925 BCANQ96GW7 911 aa18.36■□□□□ 0.53
CDKN2B-201ENST00000276925 KCNH8Q96L42 1107 aa18.32■□□□□ 0.52
CDKN2B-201ENST00000276925 SIN3AQ96ST3 1273 aa18.29■□□□□ 0.52
CDKN2B-201ENST00000276925 KIF21BO75037 1637 aa18.27■□□□□ 0.52
CDKN2B-201ENST00000276925 DDX10Q13206 875 aaKnown RBP18.25■□□□□ 0.51
CDKN2B-201ENST00000276925 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
CDKN2B-201ENST00000276925 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
CDKN2B-201ENST00000276925 ARAP1Q96P48 1450 aa18.18■□□□□ 0.5
CDKN2B-201ENST00000276925 KIF27Q86VH2 1401 aa18.17■□□□□ 0.5
CDKN2B-201ENST00000276925 CNGB1Q14028 1251 aaPredicted RBP18.16■□□□□ 0.5
CDKN2B-201ENST00000276925 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
CDKN2B-201ENST00000276925 CUX2O14529 1486 aa18.12■□□□□ 0.49
CDKN2B-201ENST00000276925 NEFLP07196 543 aa18.12■□□□□ 0.49
CDKN2B-201ENST00000276925 TRIM52Q96A61 297 aa18.11■□□□□ 0.49
CDKN2B-201ENST00000276925 PEG3Q9GZU2 1588 aa18.09■□□□□ 0.49
CDKN2B-201ENST00000276925 RAB3GAP2Q9H2M9 1393 aa18.08■□□□□ 0.48
CDKN2B-201ENST00000276925 SUPT16HQ9Y5B9 1047 aaKnown RBP18.08■□□□□ 0.48
CDKN2B-201ENST00000276925 CUX1P39880 1505 aa18.05■□□□□ 0.48
CDKN2B-201ENST00000276925 PRXQ9BXM0 1461 aa18.04■□□□□ 0.48
CDKN2B-201ENST00000276925 CHIC2Q9UKJ5 165 aa18.03■□□□□ 0.48
CDKN2B-201ENST00000276925 CARMIL1Q5VZK9 1371 aa18.02■□□□□ 0.48
CDKN2B-201ENST00000276925 TOP2BQ02880 1626 aa18.02■□□□□ 0.47
CDKN2B-201ENST00000276925 FKBP8Q14318 412 aa18.01■□□□□ 0.47
CDKN2B-201ENST00000276925 ARHGAP35Q9NRY4 1499 aa18■□□□□ 0.47
CDKN2B-201ENST00000276925 ERICH6Q7L0X2 663 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms