Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.05□□□□□ -0.32
PDCD6O75340 MIR3687-2-201ENST00000577708 61 ntBASIC13.05□□□□□ -0.32
PDCD6O75340 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.05□□□□□ -0.32
PDCD6O75340 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.05□□□□□ -0.32
PDCD6O75340 MIR3687-1-201ENST00000614492 61 ntBASIC13.05□□□□□ -0.32
PDCD6O75340 AP001059.3-201ENST00000619053 235 ntBASIC13.05□□□□□ -0.32
PDCD6O75340 LINC00628-201ENST00000628516 1289 ntBASIC13.05□□□□□ -0.32
PDCD6O75340 AL033527.5-202ENST00000641632 1098 ntBASIC13.05□□□□□ -0.32
PDCD6O75340 AC005912.2-201ENST00000619492 2400 ntBASIC13.05□□□□□ -0.32
PDCD6O75340 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
PDCD6O75340 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PDCD6O75340 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
PDCD6O75340 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
PDCD6O75340 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PDCD6O75340 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.04□□□□□ -0.32
PDCD6O75340 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.04□□□□□ -0.32
PDCD6O75340 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.04□□□□□ -0.32
PDCD6O75340 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
PDCD6O75340 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 AC140479.7-201ENST00000636301 2332 ntBASIC13.04□□□□□ -0.32
PDCD6O75340 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PDCD6O75340 AC015922.1-201ENST00000421102 1152 ntBASIC13.04□□□□□ -0.32
PDCD6O75340 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.04□□□□□ -0.32
PDCD6O75340 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
PDCD6O75340 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.04□□□□□ -0.32
PDCD6O75340 AC025048.3-201ENST00000590609 569 ntBASIC13.04□□□□□ -0.32
PDCD6O75340 AC025181.2-201ENST00000606994 802 ntBASIC13.04□□□□□ -0.32
PDCD6O75340 AC005702.4-201ENST00000618393 416 ntBASIC13.04□□□□□ -0.32
PDCD6O75340 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.04□□□□□ -0.32
PDCD6O75340 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.04□□□□□ -0.32
PDCD6O75340 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.04□□□□□ -0.32
PDCD6O75340 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
PDCD6O75340 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.04□□□□□ -0.32
PDCD6O75340 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PDCD6O75340 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.03□□□□□ -0.32
PDCD6O75340 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.03□□□□□ -0.32
PDCD6O75340 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PDCD6O75340 KRT18P64-201ENST00000434946 1219 ntBASIC13.03□□□□□ -0.32
PDCD6O75340 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.03□□□□□ -0.32
PDCD6O75340 KRT18P43-201ENST00000469825 1281 ntBASIC13.03□□□□□ -0.32
PDCD6O75340 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.03□□□□□ -0.32
PDCD6O75340 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PDCD6O75340 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.03□□□□□ -0.32
PDCD6O75340 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms