Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.73□□□□□ -0.21
PFDN1O60925 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PFDN1O60925 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 AC026992.2-203ENST00000563004 2419 ntBASIC13.73□□□□□ -0.21
PFDN1O60925 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PFDN1O60925 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
PFDN1O60925 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PFDN1O60925 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.73□□□□□ -0.21
PFDN1O60925 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.73□□□□□ -0.21
PFDN1O60925 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.73□□□□□ -0.21
PFDN1O60925 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PFDN1O60925 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.73□□□□□ -0.21
PFDN1O60925 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 AC016397.2-201ENST00000624848 1985 ntBASIC13.72□□□□□ -0.21
PFDN1O60925 AL357140.3-201ENST00000639753 1983 ntBASIC13.72□□□□□ -0.21
PFDN1O60925 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PFDN1O60925 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.72□□□□□ -0.21
PFDN1O60925 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PFDN1O60925 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
PFDN1O60925 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.72□□□□□ -0.21
PFDN1O60925 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 AC026185.1-201ENST00000445748 174 ntBASIC13.72□□□□□ -0.21
PFDN1O60925 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC13.72□□□□□ -0.21
PFDN1O60925 AC083906.2-201ENST00000511578 360 ntBASIC13.72□□□□□ -0.21
PFDN1O60925 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.72□□□□□ -0.21
PFDN1O60925 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.72□□□□□ -0.21
PFDN1O60925 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.72□□□□□ -0.21
PFDN1O60925 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
PFDN1O60925 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PFDN1O60925 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
PFDN1O60925 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PFDN1O60925 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.72□□□□□ -0.21
PFDN1O60925 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.72□□□□□ -0.21
PFDN1O60925 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PFDN1O60925 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.71□□□□□ -0.21
PFDN1O60925 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PFDN1O60925 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.71□□□□□ -0.21
PFDN1O60925 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PFDN1O60925 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.71□□□□□ -0.21
PFDN1O60925 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PFDN1O60925 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC13.71□□□□□ -0.21
PFDN1O60925 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PFDN1O60925 AL353807.1-201ENST00000427475 662 ntBASIC13.71□□□□□ -0.21
PFDN1O60925 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.71□□□□□ -0.21
PFDN1O60925 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms