Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC022144.1-201ENST00000602255 1580 ntBASIC15.14■□□□□ 0.01
CDC7O00311 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDC7O00311 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 BTBD7P1-201ENST00000447253 1453 ntBASIC15.14■□□□□ 0.01
CDC7O00311 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.14■□□□□ 0.01
CDC7O00311 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDC7O00311 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDC7O00311 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC7O00311 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 AC104457.1-201ENST00000401024 814 ntBASIC15.13■□□□□ 0.01
CDC7O00311 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
CDC7O00311 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 MEIS3P1-201ENST00000495167 958 ntBASIC15.13■□□□□ 0.01
CDC7O00311 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.13■□□□□ 0.01
CDC7O00311 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 SRD5A3P1-201ENST00000603021 949 ntBASIC15.13■□□□□ 0.01
CDC7O00311 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 AC004790.1-201ENST00000612686 536 ntBASIC15.13■□□□□ 0.01
CDC7O00311 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC7O00311 AL645728.2-202ENST00000641679 227 ntBASIC15.13■□□□□ 0.01
CDC7O00311 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDC7O00311 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDC7O00311 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDC7O00311 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CDC7O00311 CLK3P2-201ENST00000427566 1453 ntBASIC15.13■□□□□ 0.01
CDC7O00311 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.13■□□□□ 0.01
CDC7O00311 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.13■□□□□ 0.01
CDC7O00311 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDC7O00311 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDC7O00311 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.13■□□□□ 0.01
CDC7O00311 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDC7O00311 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.12■□□□□ 0.01
CDC7O00311 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
CDC7O00311 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDC7O00311 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.12■□□□□ 0.01
CDC7O00311 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 AL391069.4-201ENST00000609583 481 ntBASIC15.12■□□□□ 0.01
CDC7O00311 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.12■□□□□ 0.01
CDC7O00311 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.12■□□□□ 0.01
CDC7O00311 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDC7O00311 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC7O00311 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC7O00311 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms