Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 ACTG1P19-201ENST00000418987 1116 ntBASIC18.79■□□□□ 0.6
RGPD3A6NKT7 DUX4L50-201ENST00000455245 715 ntBASIC18.79■□□□□ 0.6
RGPD3A6NKT7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 CTSL-202ENST00000342020 933 ntTSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 IGHV1-12-201ENST00000518307 205 ntBASIC18.78■□□□□ 0.6
RGPD3A6NKT7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 OR5BD1P-201ENST00000532527 817 ntBASIC18.78■□□□□ 0.6
RGPD3A6NKT7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 AC007250.1-201ENST00000608934 338 ntBASIC18.78■□□□□ 0.6
RGPD3A6NKT7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.78■□□□□ 0.6
RGPD3A6NKT7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 GEMIN8P4-201ENST00000380526 729 ntBASIC18.78■□□□□ 0.6
RGPD3A6NKT7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 F11R-204ENST00000537746 1245 ntTSL 2 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 AC226150.1-201ENST00000544259 466 ntBASIC18.78■□□□□ 0.6
RGPD3A6NKT7 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RGPD3A6NKT7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 API5-208ENST00000531273 1868 ntTSL 2 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RGPD3A6NKT7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RGPD3A6NKT7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.77■□□□□ 0.59
RGPD3A6NKT7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.77■□□□□ 0.59
RGPD3A6NKT7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RGPD3A6NKT7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.77■□□□□ 0.59
RGPD3A6NKT7 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC18.77■□□□□ 0.59
RGPD3A6NKT7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RGPD3A6NKT7 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.76■□□□□ 0.59
RGPD3A6NKT7 HLA-DPA2-205ENST00000433582 733 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms