Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HDAC6Q9UBN7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
HDAC6Q9UBN7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HDAC6Q9UBN7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
HDAC6Q9UBN7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AC007551.1-201ENST00000457394 519 ntBASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AC093433.1-201ENST00000458048 571 ntBASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 FTH1P14-201ENST00000482930 551 ntBASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AC009486.1-201ENST00000569860 813 ntBASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AC000095.1-201ENST00000603208 874 ntBASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 AC134312.5-201ENST00000568031 1313 ntBASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HDAC6Q9UBN7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HDAC6Q9UBN7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HDAC6Q9UBN7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms