Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 AGAP7P-201ENST00000582299 2062 ntBASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 AGAP14-201ENST00000624701 2060 ntBASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 WASH3P-207ENST00000560956 1394 ntBASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 AC025181.2-201ENST00000606994 802 ntBASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 CICP4-201ENST00000447359 2812 ntBASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST2H3AQ71DI3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 AC004890.2-204ENST00000481968 304 ntBASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 AL391069.4-201ENST00000609583 481 ntBASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
HIST2H3AQ71DI3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms