Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
HMGA2P52926 LINC00628-201ENST00000628516 1289 ntBASIC14.06□□□□□ -0.16
HMGA2P52926 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.06□□□□□ -0.16
HMGA2P52926 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.06□□□□□ -0.16
HMGA2P52926 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HMGA2P52926 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 AC055811.4-201ENST00000624039 1754 ntBASIC14.06□□□□□ -0.16
HMGA2P52926 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HMGA2P52926 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HMGA2P52926 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.06□□□□□ -0.16
HMGA2P52926 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
HMGA2P52926 AC117489.1-201ENST00000625169 3217 ntBASIC14.05□□□□□ -0.16
HMGA2P52926 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGA2P52926 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGA2P52926 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
HMGA2P52926 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HMGA2P52926 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGA2P52926 RBPMS2P1-201ENST00000437762 623 ntBASIC14.05□□□□□ -0.16
HMGA2P52926 MTND6P24-201ENST00000440466 518 ntBASIC14.05□□□□□ -0.16
HMGA2P52926 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
HMGA2P52926 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.05□□□□□ -0.16
HMGA2P52926 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.05□□□□□ -0.16
HMGA2P52926 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.05□□□□□ -0.16
HMGA2P52926 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGA2P52926 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGA2P52926 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.05□□□□□ -0.16
HMGA2P52926 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.05□□□□□ -0.16
HMGA2P52926 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 AL360270.3-201ENST00000609118 1348 ntBASIC14.05□□□□□ -0.16
HMGA2P52926 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGA2P52926 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HMGA2P52926 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGA2P52926 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 LINC01230-201ENST00000625222 3017 ntBASIC14.05□□□□□ -0.16
HMGA2P52926 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGA2P52926 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HMGA2P52926 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGA2P52926 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGA2P52926 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGA2P52926 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGA2P52926 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGA2P52926 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HMGA2P52926 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms