Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS1P07996 AC012497.1-201ENST00000429392 575 ntBASIC14.23□□□□□ -0.13
THBS1P07996 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.23□□□□□ -0.13
THBS1P07996 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.23□□□□□ -0.13
THBS1P07996 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS1P07996 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC14.23□□□□□ -0.13
THBS1P07996 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.23□□□□□ -0.13
THBS1P07996 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.23□□□□□ -0.13
THBS1P07996 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
THBS1P07996 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS1P07996 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.23□□□□□ -0.13
THBS1P07996 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
THBS1P07996 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
THBS1P07996 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.23□□□□□ -0.13
THBS1P07996 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
THBS1P07996 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.22□□□□□ -0.13
THBS1P07996 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 AP002414.2-201ENST00000591780 3365 ntBASIC14.22□□□□□ -0.13
THBS1P07996 AL390755.1-201ENST00000623716 2027 ntBASIC14.22□□□□□ -0.13
THBS1P07996 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
THBS1P07996 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
THBS1P07996 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 LST1-206ENST00000376090 689 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 LST1-209ENST00000376096 565 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 LST1-210ENST00000376099 610 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 MIR943-201ENST00000401286 94 ntBASIC14.22□□□□□ -0.13
THBS1P07996 LST1-214ENST00000418507 726 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.22□□□□□ -0.13
THBS1P07996 AC009477.1-201ENST00000452936 217 ntBASIC14.22□□□□□ -0.13
THBS1P07996 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.22□□□□□ -0.13
THBS1P07996 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.22□□□□□ -0.13
THBS1P07996 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.22□□□□□ -0.13
THBS1P07996 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
THBS1P07996 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.22□□□□□ -0.13
THBS1P07996 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.22□□□□□ -0.13
THBS1P07996 RN7SL371P-201ENST00000578099 267 ntBASIC14.22□□□□□ -0.13
THBS1P07996 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.22□□□□□ -0.13
THBS1P07996 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 LINC02228-204ENST00000642115 2962 ntBASIC14.22□□□□□ -0.13
THBS1P07996 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.22□□□□□ -0.13
THBS1P07996 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.22□□□□□ -0.13
THBS1P07996 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.22□□□□□ -0.13
THBS1P07996 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
THBS1P07996 AC007326.2-201ENST00000624224 7579 ntBASIC14.22□□□□□ -0.13
THBS1P07996 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
THBS1P07996 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms