RNA–Protein interactions for RNA: ENST00000396101.7

LST1-212, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-212ENST00000396101 AEBP2Q6ZN18 517 aaPredicted RBP41.88■■■■■ 4.29
LST1-212ENST00000396101 CHIC1Q5VXU3 224 aa40.4■■■■■ 4.06
LST1-212ENST00000396101 PHF23Q9BUL5 403 aaPredicted RBP35.53■■■■□ 3.28
LST1-212ENST00000396101 SENP3Q9H4L4 574 aaPredicted RBP35.5■■■■□ 3.27
LST1-212ENST00000396101 FOXD1Q16676 465 aa33.06■■■□□ 2.88
LST1-212ENST00000396101 PLPPR3Q6T4P5 718 aa32.54■■■□□ 2.8
LST1-212ENST00000396101 PPP6R1Q9UPN7 881 aa31.48■■■□□ 2.63
LST1-212ENST00000396101 ADRA2BP18089 450 aa31.36■■■□□ 2.61
LST1-212ENST00000396101 PIAS4Q8N2W9 510 aaPredicted RBP30.99■■■□□ 2.55
LST1-212ENST00000396101 MSH5O43196 834 aa30.61■■■□□ 2.49
LST1-212ENST00000396101 POTEDQ86YR6 584 aa28.74■■■□□ 2.19
LST1-212ENST00000396101 PPP4R3CPQ6ZMV5 832 aa28.62■■■□□ 2.17
LST1-212ENST00000396101 MAPK8IP2Q13387 824 aaPredicted RBP28.6■■■□□ 2.17
LST1-212ENST00000396101 SCAF1Q9H7N4 1312 aaKnown RBP28.59■■■□□ 2.17
LST1-212ENST00000396101 DMRT2Q9Y5R5 561 aa28.32■■■□□ 2.12
LST1-212ENST00000396101 CNKSR2Q8WXI2 1034 aa27.92■■■□□ 2.06
LST1-212ENST00000396101 NCBP3Q53F19 620 aaKnown RBP27.65■■■□□ 2.02
LST1-212ENST00000396101 HOXD11P31277 338 aaPredicted RBP27.58■■■□□ 2.01
LST1-212ENST00000396101 RNF216Q9NWF9 866 aaPredicted RBP27.51■■□□□ 1.99
LST1-212ENST00000396101 KCNA4P22459 653 aa27.47■■□□□ 1.99
LST1-212ENST00000396101 NPM3O75607 178 aaKnown RBP27.37■■□□□ 1.97
LST1-212ENST00000396101 DCAF8L1A6NGE4 600 aa26.92■■□□□ 1.9
LST1-212ENST00000396101 DNAJC5BQ9UF47 199 aa26.77■■□□□ 1.88
LST1-212ENST00000396101 RNF39Q9H2S5 420 aa26.24■■□□□ 1.79
LST1-212ENST00000396101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.12■■□□□ 1.77
LST1-212ENST00000396101 SLC4A2P04920 1241 aa26.01■■□□□ 1.75
LST1-212ENST00000396101 SLC4A1APQ9BWU0 796 aaKnown RBP26■■□□□ 1.75
LST1-212ENST00000396101 C1QBPQ07021 282 aaKnown RBP25.85■■□□□ 1.73
LST1-212ENST00000396101 NISCHQ9Y2I1 1504 aa25.8■■□□□ 1.72
LST1-212ENST00000396101 U3KPZ7 1027 aaPredicted RBP25.79■■□□□ 1.72
LST1-212ENST00000396101 CACNB1Q02641 598 aaPredicted RBP25.77■■□□□ 1.72
LST1-212ENST00000396101 FOXD4L1Q9NU39 408 aa25.39■■□□□ 1.66
LST1-212ENST00000396101 ZBTB22O15209 634 aa25.34■■□□□ 1.65
LST1-212ENST00000396101 MYCNP04198 464 aaPredicted RBP25.26■■□□□ 1.63
LST1-212ENST00000396101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
LST1-212ENST00000396101 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
LST1-212ENST00000396101 SPINK5Q9NQ38 1064 aaPredicted RBP25.17■■□□□ 1.62
LST1-212ENST00000396101 SAMD1Q6SPF0 538 aaPredicted RBP25.1■■□□□ 1.61
LST1-212ENST00000396101 CAPN15O75808 1086 aa24.99■■□□□ 1.59
LST1-212ENST00000396101 APLP2Q06481 763 aa24.99■■□□□ 1.59
LST1-212ENST00000396101 DSG3P32926 999 aa24.8■■□□□ 1.56
LST1-212ENST00000396101 ZNF219Q9P2Y4 722 aaPredicted RBP24.79■■□□□ 1.56
LST1-212ENST00000396101 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
LST1-212ENST00000396101 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
LST1-212ENST00000396101 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.54
LST1-212ENST00000396101 ATF5Q9Y2D1 282 aaPredicted RBP24.69■■□□□ 1.54
LST1-212ENST00000396101 ATXN8OSP0DMR3 200 aa24.55■■□□□ 1.52
LST1-212ENST00000396101 ABCB7O75027 752 aa24.52■■□□□ 1.52
LST1-212ENST00000396101 POLA2Q14181 598 aa24.3■■□□□ 1.48
LST1-212ENST00000396101 ZBTB12Q9Y330 459 aaPredicted RBP23.84■■□□□ 1.41
LST1-212ENST00000396101 MKRN4PQ13434 485 aaPredicted RBP23.61■■□□□ 1.37
LST1-212ENST00000396101 RBM42Q9BTD8 480 aaKnown RBP23.56■■□□□ 1.36
LST1-212ENST00000396101 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
LST1-212ENST00000396101 FBLN2P98095 1184 aa23.53■■□□□ 1.36
LST1-212ENST00000396101 SPDYE2BA6NHP3 402 aa23.21■■□□□ 1.31
LST1-212ENST00000396101 SPDYE6P0CI01 402 aa23.21■■□□□ 1.31
LST1-212ENST00000396101 SPDYE2Q495Y8 402 aa23.21■■□□□ 1.31
LST1-212ENST00000396101 AKT1S1Q96B36 256 aa23.21■■□□□ 1.31
LST1-212ENST00000396101 SSUH2Q9Y2M2 353 aa23.06■■□□□ 1.28
LST1-212ENST00000396101 REM2Q8IYK8 340 aaPredicted RBP23■■□□□ 1.27
LST1-212ENST00000396101 ZNF692Q9BU19 519 aaPredicted RBP22.99■■□□□ 1.27
LST1-212ENST00000396101 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
LST1-212ENST00000396101 CHRDL2Q6WN34 429 aa22.8■■□□□ 1.24
LST1-212ENST00000396101 PITPNM1O00562 1244 aa22.76■■□□□ 1.23
LST1-212ENST00000396101 SPDYE4A6NLX3 237 aa22.74■■□□□ 1.23
LST1-212ENST00000396101 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
LST1-212ENST00000396101 POTEHQ6S545 545 aa22.62■■□□□ 1.21
LST1-212ENST00000396101 ABCC9O60706 1549 aa22.62■■□□□ 1.21
LST1-212ENST00000396101 SPDYE1Q8NFV5 336 aaPredicted RBP22.6■■□□□ 1.21
LST1-212ENST00000396101 PROM2Q8N271 834 aa22.47■■□□□ 1.19
LST1-212ENST00000396101 FXR2P51116 673 aaKnown RBP eCLIP22.46■■□□□ 1.19
LST1-212ENST00000396101 CLEC11AQ9Y240 323 aa22.46■■□□□ 1.19
LST1-212ENST00000396101 PIP4P2Q8N4L2 257 aa22.44■■□□□ 1.18
LST1-212ENST00000396101 FKBP8Q14318 412 aa22.32■■□□□ 1.16
LST1-212ENST00000396101 PRR29P0C7W0 189 aa22.21■■□□□ 1.15
LST1-212ENST00000396101 STAG3Q9UJ98 1225 aa22.19■■□□□ 1.14
LST1-212ENST00000396101 PRKAR2AP13861 404 aaKnown RBP22.13■■□□□ 1.13
LST1-212ENST00000396101 CHADLQ6NUI6 762 aa22.04■■□□□ 1.12
LST1-212ENST00000396101 CREBZFQ9NS37 354 aa21.95■■□□□ 1.1
LST1-212ENST00000396101 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
LST1-212ENST00000396101 FARP1Q9Y4F1 1045 aaPredicted RBP21.8■■□□□ 1.08
LST1-212ENST00000396101 HAX1O00165 279 aa21.73■■□□□ 1.07
LST1-212ENST00000396101 MNX1P50219 401 aaPredicted RBP21.72■■□□□ 1.07
LST1-212ENST00000396101 C19orf67A6NJJ6 358 aa21.7■■□□□ 1.06
LST1-212ENST00000396101 EVX2Q03828 476 aa21.67■■□□□ 1.06
LST1-212ENST00000396101 FBXO3Q9UK99 471 aa21.61■■□□□ 1.05
LST1-212ENST00000396101 RB1CC1Q8TDY2 1594 aa21.58■■□□□ 1.05
LST1-212ENST00000396101 NACADO15069 1562 aa21.55■■□□□ 1.04
LST1-212ENST00000396101 SP7Q8TDD2 431 aaPredicted RBP21.54■■□□□ 1.04
LST1-212ENST00000396101 MIER1Q8N108 512 aa21.53■■□□□ 1.04
LST1-212ENST00000396101 CD44P16070 742 aaKnown RBP21.47■■□□□ 1.03
LST1-212ENST00000396101 PLCD3Q8N3E9 789 aa21.45■■□□□ 1.02
LST1-212ENST00000396101 NPM1P06748 294 aaKnown RBP eCLIP21.44■■□□□ 1.02
LST1-212ENST00000396101 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
LST1-212ENST00000396101 PLEKHG5O94827 1062 aa21.4■■□□□ 1.02
LST1-212ENST00000396101 VASPP50552 380 aaPredicted RBP21.4■■□□□ 1.02
LST1-212ENST00000396101 MYO15BQ96JP2 1530 aa21.35■■□□□ 1.01
LST1-212ENST00000396101 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
LST1-212ENST00000396101 ZRANB1Q9UGI0 708 aa21.26■□□□□ 0.99
LST1-212ENST00000396101 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms