RNA–Protein interactions for RNA: ENST00000376093.6

LST1-208, leukocyte specific transcript 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LST1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-208ENST00000376093 AEBP2Q6ZN18 517 aaPredicted RBP41.88■■■■■ 4.29
LST1-208ENST00000376093 CHIC1Q5VXU3 224 aa40.4■■■■■ 4.06
LST1-208ENST00000376093 PHF23Q9BUL5 403 aaPredicted RBP35.53■■■■□ 3.28
LST1-208ENST00000376093 SENP3Q9H4L4 574 aaPredicted RBP35.5■■■■□ 3.27
LST1-208ENST00000376093 FOXD1Q16676 465 aa33.06■■■□□ 2.88
LST1-208ENST00000376093 PLPPR3Q6T4P5 718 aa32.54■■■□□ 2.8
LST1-208ENST00000376093 PPP6R1Q9UPN7 881 aa31.48■■■□□ 2.63
LST1-208ENST00000376093 ADRA2BP18089 450 aa31.36■■■□□ 2.61
LST1-208ENST00000376093 PIAS4Q8N2W9 510 aaPredicted RBP30.99■■■□□ 2.55
LST1-208ENST00000376093 MSH5O43196 834 aa30.61■■■□□ 2.49
LST1-208ENST00000376093 NISCHQ9Y2I1 1504 aa29.44■■■□□ 2.3
LST1-208ENST00000376093 POTEDQ86YR6 584 aa28.74■■■□□ 2.19
LST1-208ENST00000376093 PPP4R3CPQ6ZMV5 832 aa28.62■■■□□ 2.17
LST1-208ENST00000376093 MAPK8IP2Q13387 824 aaPredicted RBP28.6■■■□□ 2.17
LST1-208ENST00000376093 SCAF1Q9H7N4 1312 aaKnown RBP28.59■■■□□ 2.17
LST1-208ENST00000376093 DMRT2Q9Y5R5 561 aa28.32■■■□□ 2.12
LST1-208ENST00000376093 CNKSR2Q8WXI2 1034 aa27.92■■■□□ 2.06
LST1-208ENST00000376093 NCBP3Q53F19 620 aaKnown RBP27.65■■■□□ 2.02
LST1-208ENST00000376093 HOXD11P31277 338 aaPredicted RBP27.58■■■□□ 2.01
LST1-208ENST00000376093 RNF216Q9NWF9 866 aaPredicted RBP27.51■■□□□ 1.99
LST1-208ENST00000376093 KCNA4P22459 653 aa27.47■■□□□ 1.99
LST1-208ENST00000376093 NPM3O75607 178 aaKnown RBP27.37■■□□□ 1.97
LST1-208ENST00000376093 DCAF8L1A6NGE4 600 aa26.92■■□□□ 1.9
LST1-208ENST00000376093 DNAJC5BQ9UF47 199 aa26.77■■□□□ 1.88
LST1-208ENST00000376093 ABCC9O60706 1549 aa26.62■■□□□ 1.85
LST1-208ENST00000376093 CCDC180Q9P1Z9 1646 aa26.39■■□□□ 1.82
LST1-208ENST00000376093 RNF39Q9H2S5 420 aa26.24■■□□□ 1.79
LST1-208ENST00000376093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.12■■□□□ 1.77
LST1-208ENST00000376093 SLC4A2P04920 1241 aa26.01■■□□□ 1.75
LST1-208ENST00000376093 SLC4A1APQ9BWU0 796 aaKnown RBP26■■□□□ 1.75
LST1-208ENST00000376093 C1QBPQ07021 282 aaKnown RBP25.85■■□□□ 1.73
LST1-208ENST00000376093 U3KPZ7 1027 aaPredicted RBP25.79■■□□□ 1.72
LST1-208ENST00000376093 CACNB1Q02641 598 aaPredicted RBP25.77■■□□□ 1.72
LST1-208ENST00000376093 FOXD4L1Q9NU39 408 aa25.39■■□□□ 1.66
LST1-208ENST00000376093 ZBTB22O15209 634 aa25.34■■□□□ 1.65
LST1-208ENST00000376093 MYCNP04198 464 aaPredicted RBP25.26■■□□□ 1.63
LST1-208ENST00000376093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
LST1-208ENST00000376093 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
LST1-208ENST00000376093 SPINK5Q9NQ38 1064 aaPredicted RBP25.17■■□□□ 1.62
LST1-208ENST00000376093 SAMD1Q6SPF0 538 aaPredicted RBP25.1■■□□□ 1.61
LST1-208ENST00000376093 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
LST1-208ENST00000376093 CAPN15O75808 1086 aa24.99■■□□□ 1.59
LST1-208ENST00000376093 APLP2Q06481 763 aa24.99■■□□□ 1.59
LST1-208ENST00000376093 NACADO15069 1562 aa24.85■■□□□ 1.57
LST1-208ENST00000376093 DSG3P32926 999 aa24.8■■□□□ 1.56
LST1-208ENST00000376093 ZNF219Q9P2Y4 722 aaPredicted RBP24.79■■□□□ 1.56
LST1-208ENST00000376093 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
LST1-208ENST00000376093 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
LST1-208ENST00000376093 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
LST1-208ENST00000376093 EHMT2Q96KQ7 1210 aa24.7■■□□□ 1.54
LST1-208ENST00000376093 ATF5Q9Y2D1 282 aaPredicted RBP24.69■■□□□ 1.54
LST1-208ENST00000376093 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.54
LST1-208ENST00000376093 UNC13AQ9UPW8 1703 aa24.58■■□□□ 1.52
LST1-208ENST00000376093 ATXN8OSP0DMR3 200 aa24.55■■□□□ 1.52
LST1-208ENST00000376093 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
LST1-208ENST00000376093 ABCB7O75027 752 aa24.52■■□□□ 1.52
LST1-208ENST00000376093 ZCCHC6Q5VYS8 1495 aaKnown RBP24.45■■□□□ 1.51
LST1-208ENST00000376093 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
LST1-208ENST00000376093 POLA2Q14181 598 aa24.3■■□□□ 1.48
LST1-208ENST00000376093 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
LST1-208ENST00000376093 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
LST1-208ENST00000376093 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
LST1-208ENST00000376093 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
LST1-208ENST00000376093 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
LST1-208ENST00000376093 ZBTB12Q9Y330 459 aaPredicted RBP23.84■■□□□ 1.41
LST1-208ENST00000376093 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
LST1-208ENST00000376093 DNAJC5Q9H3Z4 198 aa23.7■■□□□ 1.38
LST1-208ENST00000376093 MKRN4PQ13434 485 aaPredicted RBP23.61■■□□□ 1.37
LST1-208ENST00000376093 RBM42Q9BTD8 480 aaKnown RBP23.56■■□□□ 1.36
LST1-208ENST00000376093 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
LST1-208ENST00000376093 FBLN2P98095 1184 aa23.53■■□□□ 1.36
LST1-208ENST00000376093 SPDYE2BA6NHP3 402 aa23.21■■□□□ 1.31
LST1-208ENST00000376093 SPDYE6P0CI01 402 aa23.21■■□□□ 1.31
LST1-208ENST00000376093 SPDYE2Q495Y8 402 aa23.21■■□□□ 1.31
LST1-208ENST00000376093 AKT1S1Q96B36 256 aa23.21■■□□□ 1.31
LST1-208ENST00000376093 CUX2O14529 1486 aa23.11■■□□□ 1.29
LST1-208ENST00000376093 SSUH2Q9Y2M2 353 aa23.06■■□□□ 1.28
LST1-208ENST00000376093 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
LST1-208ENST00000376093 REM2Q8IYK8 340 aaPredicted RBP23■■□□□ 1.27
LST1-208ENST00000376093 ZNF692Q9BU19 519 aaPredicted RBP22.99■■□□□ 1.27
LST1-208ENST00000376093 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
LST1-208ENST00000376093 NCAPD3P42695 1498 aa22.91■■□□□ 1.26
LST1-208ENST00000376093 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
LST1-208ENST00000376093 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
LST1-208ENST00000376093 BAZ1AQ9NRL2 1556 aaPredicted RBP22.86■■□□□ 1.25
LST1-208ENST00000376093 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
LST1-208ENST00000376093 CHRDL2Q6WN34 429 aa22.8■■□□□ 1.24
LST1-208ENST00000376093 PITPNM1O00562 1244 aa22.76■■□□□ 1.23
LST1-208ENST00000376093 SPDYE4A6NLX3 237 aa22.74■■□□□ 1.23
LST1-208ENST00000376093 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
LST1-208ENST00000376093 NESP48681 1621 aa22.71■■□□□ 1.23
LST1-208ENST00000376093 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
LST1-208ENST00000376093 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
LST1-208ENST00000376093 POTEHQ6S545 545 aa22.62■■□□□ 1.21
LST1-208ENST00000376093 SPDYE1Q8NFV5 336 aaPredicted RBP22.6■■□□□ 1.21
LST1-208ENST00000376093 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
LST1-208ENST00000376093 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
LST1-208ENST00000376093 WIZO95785 1651 aa22.49■■□□□ 1.19
LST1-208ENST00000376093 PROM2Q8N271 834 aa22.47■■□□□ 1.19
LST1-208ENST00000376093 FXR2P51116 673 aaKnown RBP eCLIP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms