Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 STRCP1-201ENST00000509801 5328 ntBASIC11.67□□□□□ -0.54
HLA-DQA1P01909 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 RCN1P2-201ENST00000398357 915 ntBASIC11.67□□□□□ -0.54
HLA-DQA1P01909 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 AC011467.4-201ENST00000594891 528 ntBASIC11.67□□□□□ -0.54
HLA-DQA1P01909 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 AC021097.1-201ENST00000607902 574 ntBASIC11.67□□□□□ -0.54
HLA-DQA1P01909 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
HLA-DQA1P01909 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 POM121L3P-201ENST00000419331 1163 ntBASIC11.66□□□□□ -0.54
HLA-DQA1P01909 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 LINC01711-201ENST00000598340 967 ntBASIC11.66□□□□□ -0.54
HLA-DQA1P01909 AL591684.3-201ENST00000605187 298 ntBASIC11.66□□□□□ -0.54
HLA-DQA1P01909 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HLA-DQA1P01909 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms