Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PMS2P4-201ENST00000412466 1052 ntBASIC12.27□□□□□ -0.45
IFNA1P01562 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.27□□□□□ -0.45
IFNA1P01562 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.27□□□□□ -0.45
IFNA1P01562 AL031055.1-201ENST00000606362 631 ntBASIC12.27□□□□□ -0.45
IFNA1P01562 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.27□□□□□ -0.45
IFNA1P01562 AL805961.1-202ENST00000641562 540 ntBASIC12.27□□□□□ -0.45
IFNA1P01562 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
IFNA1P01562 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.27□□□□□ -0.45
IFNA1P01562 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.27□□□□□ -0.45
IFNA1P01562 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.27□□□□□ -0.45
IFNA1P01562 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.27□□□□□ -0.45
IFNA1P01562 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
IFNA1P01562 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.27□□□□□ -0.45
IFNA1P01562 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 AC015802.1-201ENST00000588104 1449 ntBASIC12.27□□□□□ -0.45
IFNA1P01562 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.27□□□□□ -0.45
IFNA1P01562 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
IFNA1P01562 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.26□□□□□ -0.45
IFNA1P01562 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
IFNA1P01562 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.26□□□□□ -0.45
IFNA1P01562 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.26□□□□□ -0.45
IFNA1P01562 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.26□□□□□ -0.45
IFNA1P01562 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
IFNA1P01562 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 RNU1-129P-201ENST00000384064 167 ntBASIC12.26□□□□□ -0.45
IFNA1P01562 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
IFNA1P01562 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
IFNA1P01562 KRT17P6-201ENST00000453795 1220 ntBASIC12.26□□□□□ -0.45
IFNA1P01562 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
IFNA1P01562 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.26□□□□□ -0.45
IFNA1P01562 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 U1.21-201ENST00000580816 167 ntBASIC12.26□□□□□ -0.45
IFNA1P01562 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.26□□□□□ -0.45
IFNA1P01562 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 GGTLC5P-201ENST00000617623 998 ntBASIC12.26□□□□□ -0.45
IFNA1P01562 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.26□□□□□ -0.45
IFNA1P01562 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.26□□□□□ -0.45
IFNA1P01562 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.26□□□□□ -0.45
IFNA1P01562 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.26□□□□□ -0.45
IFNA1P01562 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.26□□□□□ -0.45
IFNA1P01562 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
IFNA1P01562 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
IFNA1P01562 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.25□□□□□ -0.45
IFNA1P01562 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
IFNA1P01562 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.25□□□□□ -0.45
IFNA1P01562 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms