Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN9O14815 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN9O14815 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CAPN9O14815 AC090616.6-203ENST00000579186 1945 ntBASIC16.36■□□□□ 0.21
CAPN9O14815 FAM45BP-202ENST00000592932 1624 ntBASIC16.36■□□□□ 0.21
CAPN9O14815 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN9O14815 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN9O14815 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN9O14815 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CAPN9O14815 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CAPN9O14815 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN9O14815 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN9O14815 SLC7A15P-201ENST00000424028 1363 ntBASIC16.36■□□□□ 0.21
CAPN9O14815 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN9O14815 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN9O14815 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CAPN9O14815 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN9O14815 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN9O14815 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CAPN9O14815 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN9O14815 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 AL009178.2-201ENST00000597278 2719 ntBASIC16.35■□□□□ 0.21
CAPN9O14815 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN9O14815 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CAPN9O14815 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CAPN9O14815 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN9O14815 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN9O14815 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 AC104596.2-201ENST00000512793 793 ntBASIC16.35■□□□□ 0.21
CAPN9O14815 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN9O14815 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN9O14815 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN9O14815 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN9O14815 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN9O14815 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN9O14815 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN9O14815 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CAPN9O14815 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN9O14815 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN9O14815 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN9O14815 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN9O14815 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN9O14815 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CAPN9O14815 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN9O14815 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN9O14815 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CAPN9O14815 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CAPN9O14815 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN9O14815 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.34■□□□□ 0.21
CAPN9O14815 RRP7BP-205ENST00000566851 833 ntBASIC16.34■□□□□ 0.21
CAPN9O14815 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN9O14815 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CAPN9O14815 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CAPN9O14815 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CAPN9O14815 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 CLK3P2-201ENST00000427566 1453 ntBASIC16.34■□□□□ 0.21
CAPN9O14815 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN9O14815 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN9O14815 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN9O14815 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN9O14815 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN9O14815 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN9O14815 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CAPN9O14815 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms