Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 KRT8P48-201ENST00000515599 1220 ntBASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 KRT8P23-201ENST00000560090 1207 ntBASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AC027307.2-201ENST00000591252 911 ntBASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AC022145.2-201ENST00000598203 171 ntBASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AC008267.7-201ENST00000624570 1194 ntBASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 C18orf15-201ENST00000623680 2534 ntBASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 AL928921.2-201ENST00000641325 2442 ntBASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 LINC01144-201ENST00000626198 1710 ntBASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
R3HCC1Q9Y3T6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 ADH5P3-201ENST00000433842 1137 ntBASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 POU5F1P6-201ENST00000466990 990 ntBASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 PRYP6-201ENST00000514804 343 ntBASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 AL513210.1-201ENST00000629608 234 ntBASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 AC148477.4-201ENST00000613430 1793 ntBASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 AC090616.6-203ENST00000579186 1945 ntBASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.8■□□□□ 0.44
R3HCC1Q9Y3T6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 AC099521.3-201ENST00000624251 2938 ntBASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 AC004461.1-201ENST00000412461 403 ntBASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.79■□□□□ 0.44
R3HCC1Q9Y3T6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms