Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
MUC4Q99102 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
MUC4Q99102 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
MUC4Q99102 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
MUC4Q99102 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
MUC4Q99102 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.33□□□□□ -0.6
MUC4Q99102 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
MUC4Q99102 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
MUC4Q99102 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.33□□□□□ -0.6
MUC4Q99102 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.33□□□□□ -0.6
MUC4Q99102 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.33□□□□□ -0.6
MUC4Q99102 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 RARRES2P9-201ENST00000565168 469 ntBASIC11.33□□□□□ -0.6
MUC4Q99102 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 CICP14-201ENST00000629111 2732 ntBASIC11.33□□□□□ -0.6
MUC4Q99102 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.33□□□□□ -0.6
MUC4Q99102 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 AC097359.2-201ENST00000604992 2389 ntBASIC11.33□□□□□ -0.6
MUC4Q99102 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.33□□□□□ -0.6
MUC4Q99102 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
MUC4Q99102 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 RPL5P21-201ENST00000404620 815 ntBASIC11.33□□□□□ -0.6
MUC4Q99102 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.33□□□□□ -0.6
MUC4Q99102 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.33□□□□□ -0.6
MUC4Q99102 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.33□□□□□ -0.6
MUC4Q99102 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.33□□□□□ -0.6
MUC4Q99102 AC140878.1-201ENST00000565277 250 ntBASIC11.33□□□□□ -0.6
MUC4Q99102 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MUC4Q99102 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
MUC4Q99102 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.32□□□□□ -0.6
MUC4Q99102 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.32□□□□□ -0.6
MUC4Q99102 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.32□□□□□ -0.6
MUC4Q99102 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.32□□□□□ -0.6
MUC4Q99102 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.32□□□□□ -0.6
MUC4Q99102 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
MUC4Q99102 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
MUC4Q99102 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
MUC4Q99102 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
MUC4Q99102 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 298.9 ms