Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 AC087499.6-201ENST00000411576 835 ntBASIC15.98■□□□□ 0.15
IFT43Q96FT9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 DFFBP1-201ENST00000433250 979 ntBASIC15.98■□□□□ 0.15
IFT43Q96FT9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 AC010336.2-201ENST00000564226 506 ntBASIC15.98■□□□□ 0.15
IFT43Q96FT9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.98■□□□□ 0.15
IFT43Q96FT9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IFT43Q96FT9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 GK-202ENST00000378941 458 ntTSL 3 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 COX5BP8-201ENST00000416911 349 ntBASIC15.97■□□□□ 0.15
IFT43Q96FT9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 TARDBPP1-201ENST00000442013 1203 ntBASIC15.97■□□□□ 0.15
IFT43Q96FT9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 AL512361.1-201ENST00000554200 418 ntBASIC15.97■□□□□ 0.15
IFT43Q96FT9 AC140912.1-201ENST00000577171 1054 ntBASIC15.97■□□□□ 0.15
IFT43Q96FT9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 AL132655.2-201ENST00000596276 594 ntBASIC15.97■□□□□ 0.15
IFT43Q96FT9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IFT43Q96FT9 AC007541.1-201ENST00000570282 1469 ntBASIC15.97■□□□□ 0.15
IFT43Q96FT9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.97■□□□□ 0.15
IFT43Q96FT9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 AC098614.1-201ENST00000368528 745 ntBASIC15.96■□□□□ 0.15
IFT43Q96FT9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IFT43Q96FT9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.96■□□□□ 0.15
IFT43Q96FT9 AC114501.2-201ENST00000439631 535 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms